Betta splendens (Siamese fighting fish): 114851856
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Entry
114851856 CDS
T08231
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X2
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bspl01002
]
114851856 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bspl04121
]
114851856 (usp47)
Enzymes [BR:
bspl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114851856 (usp47)
Peptidases and inhibitors [BR:
bspl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114851856 (usp47)
Ubiquitin system [BR:
bspl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114851856 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
CP2
Motif
Other DBs
NCBI-GeneID:
114851856
NCBI-ProteinID:
XP_028999511
EnsemblRapid:
ENSBSLG00000017632
UniProt:
A0A6P7LXH5
LinkDB
All DBs
Position
3:15090621..15104717
Genome browser
AA seq
1366 aa
AA seq
DB search
MEMVPSEENQFVPKEIQNAAEEPRVLCIIQDITSAKTVNERLTLNLPASTTLSKLYEDVA
HKAGYLKGTFALAWGNTPDMTPLDHHSEMSLSESAFEPGGKRNFLQLTDKDGEQPQIVSD
ESGTADSSGLDDSTQERFIGPLPRDGSVGCSGDYSSPSYSYSSILTKSETGYVGLVNQAM
TCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQRLFVLLQTSRKRAIETTD
VTRSFGWDSSEAWQQHDIQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECG
YESWRIDTYLDIPLVIRPFGSSQAYGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARK
GLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCT
DSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTTSSERILKPKSLLTFELFSIMVHSGS
AAGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYM
LIYRLKDPSRNAKCLSVEDFPEHIKNLVQKEKEFEEQEKRQREIERNTCKIKLFCMHPAK
MMMESKLEVHKDKTLKEATEMAYKLMELEGVVPLDCCRLVKYDEFHEYLERSYEGEEDTP
MGLLLGGVKSSYMFDLLLETRQPDQVFQPYKPGEVMVKVHVVDLKNETIATPVSVRAYLN
QTVTEFKQLISQATGLSAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSSS
ADHQVAFTDSLLWKLLDRHGNTIRLLVLLPDQSPGTLANRTLCQKVGGDSDVAFDGSKVN
QQSVEAILEESTEKLKNLSLQQQHQGSSTSDSQKSSDASDFEHIESPSQEADSSSSICVP
ADNRELENRIRATAASSGGASSDPDNQFACEERSDSEVNNDRSTSSVDSDILSSSHSSDT
LCNADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEFDDNGKSKAEAQ
YLYFRAEPSSQDDSPGRDAQKCLVVHVDKRITLAAFKLNLEPYVGVTSTQFKVFRVYVNN
QEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLVDTVFAKG
MTVRQSKEELLPLLKEQCKLDLSIDRVRLRKKTWKNPATVFLDYHVYEEDISISSNWEVF
LEVLSEPEKMKSTSQLAVLTRRWNPATMTLGPFQEVILESSSVEELKEKLSEISNIPLEN
LDFAKGRGTFPCDISVLEIHQDLDWNPKVSTLKVWPLYICDDGAVVFYRDSTEDPMELTE
EERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPAKDWGLD
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagcgaggagaaccagttcgtacccaaggagatccaaaatgcagct
gaggagcccagggtactgtgcattattcaggacatcaccagtgcaaagacagtcaacgag
aggctgaccctcaacctgcccgcttccaccaccctctccaaactctatgaagatgttgcc
cacaaagcaggatatttaaaaggcacttttgctcttgcctggggcaatacaccagacatg
acgcccctggatcaccacagtgagatgtccctctcagagtctgcgtttgagcctggcggt
aagaggaattttctccagctgacggacaaggacggagagcaaccccagattgtgtcggat
gagtcaggaacagcagatagcagtggcctggatgacagtacccaggagcggtttattggg
cctctaccgagagacggcagcgtcggttgcagcggtgactacagcagtccatcttactcc
tactcgtccatcctcaccaaatctgagacagggtatgtgggcttggtcaaccaagctatg
acctgctacttgaacagtcttctacaaacgctgtttatgaccccggagttcaggaatgca
ctctacaactgggagttcgaggaatcagaggaggatccagtcacaagtatcccctaccag
ctgcaaaggctgtttgtcctgctgcagaccagtaggaaacgtgcaattgagaccactgat
gtgacacggagctttggctgggacagcagtgaggcttggcagcagcatgatatccaggag
ctttgcagggtcatgtttgatgccctggagcagaagtggaaacagacagagcaggctgac
ctgatcaaccagctgtaccagggaaagctgaaggattatgtccgatgtctggagtgtggc
tatgagagctggaggattgatacttacctagatattcctcttgtgatcagaccctttgga
tccagccaagcctatggcagtgtggaggaggctttgcaagcattcatccaaccagaaact
ctggatgggcccaaccagtacttctgtgaacgttgcaaaaagaaatgtgatgcccgcaag
ggtctgaggtttctgcactttccctacctgctgactctacaacttaagagatttgacttt
gactacaccactatgcaccgtatcaagcttaatgaccgcatgactttccctgaggagctt
gacatgagtccatttattgatgtggaagatgagaagtcgcctcagacagagagctgcacc
gacagcggagcagagaatgaaggcagttgtcacagcgaccagatgagcaatgatttttcc
actgatgattgtgttgatgagggtatctgcttggacagcaccaccagctcagagaggata
ttgaagccaaagagtttgctgacctttgaactgttctccatcatggttcattctgggagc
gctgcgggtggccactactatgcctgcattaaatccttcagtgatggccagtggtacagt
ttcaatgatcagcacgtcagcaagatcacccaggatgatatcaggaagacgtatgggggc
tcctcagggagcagaggctattattccagtgcctttgcgagctctacaaatgcatatatg
ctgatttataggctgaaagacccctcaaggaatgcaaagtgtttgtctgttgaagacttt
ccagagcacatcaagaacttagttcagaaggagaaagagtttgaagagcaagaaaagagg
cagcgggagattgagcgcaacacctgtaagatcaagcttttctgcatgcatcctgcaaag
atgatgatggaaagcaagctggaggtgcataaggacaaaactctaaaagaagcaacagag
atggcctacaagctgatggagctggagggagtcgtccctctggattgctgtcgcttggtt
aagtacgatgagttccatgaatacctggagcgttcctacgaaggggaggaggacacaccg
atgggcctcctgctgggtggagtcaagtcatcatacatgtttgacttactgctcgagact
cgacagccagatcaagtgttccagccctataaacctggagaggtgatggtaaaggtccat
gttgtggatctgaagaatgagaccattgccactccagtcagtgttcgggcatatttgaac
cagactgtcactgaattcaaacaactcatttcacaggctacaggtctttctgcagaaacc
atgcgtgtggtcctggagcgatgctataatgacctccggctcctttacgttccaaacaag
acactgaaagctgaaggattcttcaggagtaacaaggtttttgtagagagctcaagttca
gcagatcatcaggttgctttcaccgactcactgttgtggaaactgttggatcgtcatggg
aatacgatccgactcttggttttattgcccgaccaatctcctggcacattggccaacaga
actctttgtcaaaaagtaggaggtgactctgatgtggcctttgacgggtcaaaggttaac
cagcaatctgtagaggcgattcttgaggagagcacagaaaagttaaagaatctgtctctg
cagcagcagcaccagggctccagcactagtgacagccagaaaagctccgacgcaagcgac
tttgagcatatagagtctccaagccaagaggccgactccagttcttcgatatgtgtgcct
gcagacaacagagagctagagaaccggatccgtgccacagctgcgagcagtggcggcgcc
tcctctgaccctgacaaccagttcgcctgcgaggagcgctcagactctgaggtgaacaac
gaccgaagcaccagctcagtggacagcgacatcctgagctccagccacagcagcgacacg
ctgtgcaatgccgacagtgggcccatacagctggccaatggcctggactcgcacagcatc
acaagcagccgacgctccaaagcccatgagggcaaaaaggagacctgggacactgctgaa
gaagactctgggaccgacagcgagtttgacgacaatggcaagagcaaggcagaggctcag
tacctttacttcagagcagagccttcttcgcaggatgactctcctggcagggatgcacaa
aaatgtttagtggttcatgtggacaagagaataacattagcagcatttaagctgaacttg
gaaccctacgtaggcgtcacctcaacccagttcaaggtgtttcgggtctatgtcaacaac
caggagtttgagagtgtgcgactgaatgaaacactctcatcgttctcggatgataacaag
ataactattcgactaggaagggcactgaaaaaaggcgaatacagagttaaagtatatcaa
ctactagtgaatgaaccagagccttgcaagttccttgtggacacggtgtttgccaagggc
atgactgttagacagtccaaagaggagctgcttcctctgctgaaagagcagtgcaagctt
gaccttagcatcgacagggttcgtctcaggaaaaagacgtggaagaacccagcgacagtg
tttctggactaccatgtctacgaagaagacatcagcatttcctctaactgggaggttttc
ttggaagtccttagtgaaccagagaagatgaagtccacgtcacagctggcggttctgacc
cggagatggaaccctgctacaatgacgctgggtccgttccaggaagtgattctggagagt
agcagtgtagaagaacttaaagaaaagcttagtgaaataagtaatattcctctagaaaac
ctggactttgccaagggtagaggaacatttccttgtgacatttctgtgttagagattcat
caggatttggactggaatcctaaggtttcaacacttaaagtgtggcctctgtacatctgt
gatgatggagctgtggtcttctatagggacagcacagaagaccctatggagttgactgaa
gaggagcgcaatgagctgatgaagaaggagagcagccgcctgcttaaaactggacaccgt
gtcagctactcgccacgcaaggagaaagccctcaagatctacctggacggaggccctgcc
aaggactgggggctggactga
DBGET
integrated database retrieval system
