Betta splendens (Siamese fighting fish): 114858744
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Entry
114858744 CDS
T08231
Symbol
pcm1
Name
(RefSeq) pericentriolar material 1 protein isoform X1
KO
K16537
pericentriolar material 1 protein
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bspl03036
]
114858744 (pcm1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bspl03037
]
114858744 (pcm1)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
114858744 (pcm1)
Cilium and associated proteins [BR:
bspl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114858744 (pcm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCM1_C
Motif
Other DBs
NCBI-GeneID:
114858744
NCBI-ProteinID:
XP_029012132
EnsemblRapid:
ENSBSLG00000008147
UniProt:
A0A6P7MYR1
LinkDB
All DBs
Position
1:complement(4936208..4951620)
Genome browser
AA seq
2108 aa
AA seq
DB search
MATGGAPFGDSAEELHNWVVSNGSLEDRLNNMDWGVQQKKPNRSSEKNKKKLPAVVVESR
LTNDISPESTPGAGRRRARTPHSFPHIKYTTQMSVPDQAELDKLRQRINFTDLDERSIGS
DSQGRVTTANNQRQVAGETKKPYNFLPLHVNTNKSKELLPPSSSAPTTPAIMKEAKKQSP
GFRDTLTPVVPIKESPRLSRGGTERGLLVQREYGRGQSRIDSSQVVSKLVQIREYISKVS
SMRDDLVEKNDVPANVERLSQLIDHLKEKEKSYLRFLQKMLARENEEDYGGTLDSAVGSG
SLAVSTTLNIEVHSPDTSNATGGRPESVCVDEKEELENLCKQHDLLKKMLAQQEQLRALQ
GRQEALMAMQHSAEQALAVIEDTVVTETTGSVSGLSITSELNEELNELIQRFHNQLHDSQ
TKAVPDNRRQAESLSLSREVSWSRSPQAMGPPQHRPLLHSASGPQIGLDTGATAASTKLT
KLQELQDKKQTMDKILQELHSLRDQTLNNNSCRGLPTQYSLSMGGSSDCPPSLCPSGASV
STSFHPSLAEQQNSSNSTDKLRKLKEVHKRLNELRELVQYYEQTSDMMVDAVNENVKEAD
DEEEEEDETEDSSMFEAMFDSEQENRHPVTNIRNSQRSGNWTDLNSLTNGRSVRSGAANN
RDGRLNTECEINNRSAANLRSLNISSVIDCQYNRDTSYNEVKDEDEEEEGVDNEVPQAVA
PDSEASGSSRRSSLDGSFAQNAHRQTAKQKLQQLKELVAMVQSDDTDATTANEEEALHQQ
PNNTRATPSRSQGSGSKQNARDLTLSSKAREKLYEEKLLQQKQELKQLHEERQRLIEIQG
KIQDLQWACPDLQSSVSSTASQQGLLRKVPIAVSTPATVQASSSSKTNPIVLKPTAPEAA
TSSVTDNEQLWSEMRRHQILREELRQRRKHLESLMAEHQRRSGLNDSPCQTEDQDGLATP
PQTVSRDERTMATWGSTPCNLDGDDEDEYQSEVGVEEEEEQEECTESSSDEDDIHIYSSS
RNQCSYSNRNNHGSNLKPPPAFSGDDSRHFQNKTQAKQQHQQSRSLNQSVSQQAGARRQE
NLRWASELSFIEGSCQWQDQVNQLQKQLDFSTSMCQTLLQDQQMLSYMLQTLLTGQYSVL
PNNLSSPQVHLVMHQLNQCYTQLAWQQNNVQRLKQVLNDLVQQQQQQQQPSSSAGWQTQK
QTSSQESNSGPSASPGVFLPFSSAQHPLANNLSTTALSPFPPGFNMCPPFPAALGEFPQG
ATGQASPDHHKQQLDPNTSIKTEYMSFPPPLQRSPLNTATEREPAKWLNTSYANNTVHHR
PSKNEPQQSLSSSPVFNHQSQPQDFDQASQESFSSMPGPVDPATVTKTFKAGHKASAKAN
LASRSKTPNSKSRRRRSKGHNKNSKVYESDSVSSTADFTQERAAASRQKDQNQSLLDKLT
QEKLDSKTKPGNKRNDLSSAYAWRTPFLSNRIACTEAPDASSDFSLFEALRETIYSEVAT
LISQNESRPHFLIELFHELQLLNTDYLRQRALYSLQDIVTRHLAEKSAAEDQLPPLGPVV
WTAGSQSELTPSESLATSDAEVVEKNLRLTQDTVKKRDDAESMDNDSTMSTSSNLEPFAN
DDLGNTVIHLDKALARIREYERMKLKAEFTPCNGSTAGAAGSDAAIADHPSANPAEPVEG
GEAGDVHCPQIDTQQLDRQIKAIMTEVIPFLKENMDEVCSLQLLTSVRRMVLTLTQQNDE
SKEFVRFFHKQLGGILQDSLSKFVGRTLKDCGEDLLVEISEILFNELAFFKLMQDLDSNS
SSIALAAKHRNKKRTEKPRTKNSPRENPVAGSFSPAYTDEDKDQDEAEQAGDSTLQELYL
QTEKKNSQSSEASDLEEEDEGHGQRMPLSISLSKAETQALTNYGSGEDENEEEEIEEFEA
GPVEVQTSLQASADGQMEQEGTTATEGQETKTEQTNSENEEIKVAVEAVDSTVDEQTTVE
SHEEDSKGGEAAVAASEENTVFHSQDISKEPMSTSSPDTDSPVMINVDEMGSGNTSQKSD
EEDFVKVEDLPLQLTVMCEEELQKRIVEEQQNNNLSVEILNGNTGPMTGLVGNAQALKEP
DTTDSPSI
NT seq
6327 nt
NT seq
+upstream
nt +downstream
nt
atggcgactggaggcgctccgttcggtgacagtgcagaagagctccacaactgggttgtt
tccaatggcagcctggaagatcgactcaacaacatggactggggtgtgcagcagaaaaaa
cccaaccgatcctctgagaaaaacaagaagaagttgccggctgtggttgtggagagccgc
ctgactaatgatatctcaccagagtccaccccaggggccggtcgcaggagagcccgcacc
cctcattccttccctcacatcaaatataccactcagatgtctgtcccagaccaggctgag
ctggacaagctgcgtcagaggatcaatttcaccgacctggatgagaggagcattggcagt
gattcgcagggtcgtgtcacaacagccaacaatcagcgccaggtagctggagagaccaag
aagccctacaacttcctacctctgcatgtaaacactaacaaaagcaaggagctgctccct
ccctcctcttcggccccaaccaccccagctatcatgaaggaggccaaaaagcagagccca
ggatttagggatacattaactcccgtggttcctatcaaggaatcaccgaggctcagtcgt
ggcggtaccgagagagggctcttggtgcagagagaatatggaagaggacagtcaagaata
gacagcagtcaggttgtgagcaaactggtacagatcagagagtacataagtaaggtgagc
tccatgcgcgatgacctggtggagaagaatgatgtgccggcaaatgtggagcgtctttct
caacttatcgaccacctcaaggagaaggagaagtcctatttacggtttctgcagaagatg
ctggcacgggagaatgaagaagattatggggggacccttgactctgcagtgggctcaggt
tctctggcagtgagcactactctaaacattgaggttcactcgcctgatacttcaaatgca
acgggcggcagaccagaatctgtgtgtgtggacgagaaggaagagttggagaatctgtgt
aagcagcatgatttgctgaagaaaatgctggcgcagcaagagcagctcagggccctgcag
ggccgacaggaggcactgatggccatgcagcacagtgcagaacaagcactggctgtgatt
gaagacactgttgtcacagaaaccacaggcagtgtgtcaggcttgagcatcacgtcagaa
ctgaatgaagagctaaatgaattgatccagcgattccacaatcagcttcatgactctcag
accaaagcagtgccagacaaccgtcgtcaggcagagagtctttccctatccagagaggtg
agctggtctaggtctccccaggctatgggtccacctcagcacagacctcttctccactca
gcctcaggccctcaaattggtcttgatacaggagcaacagctgctagcaccaaactcacc
aagctccaagagctccaagacaaaaaacaaactatggacaagatacttcaggagttgcat
tcactcagagaccagactctcaataataattcatgtcgtggcttgccaacacagtacagt
ctgagtatgggaggatcttcagattgtccaccttctctctgtcctagtggggcatcagtt
tccacttcctttcatccttcactcgcagaacagcagaacagctctaactccacagacaaa
ctcagaaagctaaaggaagtccacaagcgtttgaatgagctgcgagaattggttcagtac
tatgaacagacttctgatatgatggtggatgctgtcaatgagaatgtgaaagaggctgat
gatgaagaggaggaggaagatgagacagaggacagttctatgtttgaggccatgtttgac
tctgaacaggagaaccgccatcctgtgactaatatcagaaactcccagcgcagtggaaac
tggacggacttaaacagcctgaccaacggacggagtgtaagaagtggtgccgctaacaac
cgtgatggcagacttaacacagagtgcgagatcaacaaccggtcggcagccaacctccgt
agcctcaacatctcctcagttatagattgtcagtacaatagggacacatcttataatgaa
gtgaaggatgaggatgaagaagaggaaggtgttgataatgaagtgccacaggctgttgct
ccagacagtgaggcatcaggatctagtcggagaagcagcttggatggaagttttgcccag
aatgcacatcgacaaactgcgaagcaaaaactccagcagctgaaggaacttgtagcaatg
gttcagagtgacgacaccgatgccacaactgcgaatgaggaggaagctttacatcagcag
ccgaacaataccagagccactccatctaggtcacaaggatccggatctaaacagaatgcc
agagatctgaccctctctagcaaggccagagaaaagctatatgaggagaagctgcttcag
cagaagcaagagttaaagcagctgcatgaagagcgccagaggctcattgagatacaaggc
aagatccaagaccttcagtgggcttgccctgacctccagtcatctgtgtccagcactgcg
agccagcaaggcttgctgaggaaggtcccaatagcagtttccactccagccactgttcag
gcttcttcatcctccaaaactaaccccattgtactcaaacctactgctccagaagcagct
acatcttcagtcactgacaatgagcagctttggtcagagatgcgtcgccaccagatcctg
cgggaagaattgcgtcaacgtagaaaacacttggagtccttgatggctgaacaccagaga
cgtagtggtctcaacgattccccttgccagactgaagatcaagatggcctcgctacgccc
ccacaaactgttagtagggatgaaaggacgatggcgacctggggttccactccctgtaac
ctggatggtgatgatgaggatgaatatcaatcagaggtgggtgtagaagaggaagaagag
caggaagaatgtacagagagcagctctgatgaagacgacatccacatctactcatcaagc
aggaaccaatgctcctacagtaacagaaacaaccatggaagtaatctgaagcccccacca
gctttctcaggtgatgatagtcgacattttcaaaacaagactcaggccaaacaacagcac
caacagtccagaagcctaaaccagtctgtgagccagcaggcaggtgctcgacggcaagaa
aacctacgctgggcatccgagctctcatttattgaaggctcatgccagtggcaggaccaa
gtcaaccagctgcagaaacagctggacttcagcaccagcatgtgtcaaacgctcctgcag
gaccagcagatgttgtcgtacatgttgcaaaccctgctgacaggtcagtacagcgtgtta
cctaacaatctgtcatccccacaagtccacctggtcatgcaccagctcaaccagtgttac
acccagctggcttggcaacaaaacaatgtacaaagactaaagcaggtcctgaacgacctt
gtgcagcagcagcagcagcagcagcagccttcctcatcagcgggttggcaaacacagaag
cagacctcatcccaggaatctaattctggcccctcagcttctcctggtgtctttctccct
ttctcctctgcccaacatcctttagccaacaacttgtcaactactgccttatcgccattc
cctcctggctttaacatgtgtccgccgtttcctgctgctctgggtgagttccctcagggt
gcaacaggccaggcttctcctgaccaccacaagcagcagttggaccccaacacttctatc
aaaacggaatacatgagttttcctcctccactgcaacgctctcctcttaacactgctaca
gaaagagaaccagctaaatggcttaacaccagttatgcaaacaacaccgtccaccatcgg
ccgtcgaaaaatgaacctcaacagtcgttatcctcgtcccccgtgttcaaccaccagtca
caacctcaagactttgaccaggcgtcgcaggaaagtttcagcagcatgccaggtcctgtt
gatcccgccaccgttacaaagactttcaaggctggacacaaggcctctgccaaagccaac
ctcgcctcccgcagtaaaactcccaattccaagagtcgccgcaggaggagcaaaggacat
aacaagaacagtaaagtgtatgagagtgacagtgttagcagcactgcagacttcacccag
gagagggcagctgcgtctcgtcaaaaagatcagaaccagagtttattggataagctgact
caagagaaactagacagcaaaactaagcctgggaataaacgaaatgacctctcttcagcc
tatgcttggagaacacccttcctctctaacagaattgcatgcacagaagcaccagatgcg
agcagtgatttctcactctttgaagcactgagggagaccatttactctgaagtggctact
ttgatatctcagaatgagtcccgaccccactttctcattgaacttttccatgagctgcag
ctgctcaacaccgactacttacggcagagggcactgtattccctacaggatatcgttacc
agacatttggcagagaagagtgcggctgaggaccagttgcctcctcttggtcctgtggtg
tggactgcaggctctcagtctgagctgacacccagtgagagcctagccaccagtgatgca
gaggtggtggagaaaaaccttaggctcacacaagacacagtgaagaagagggatgatgct
gaatccatggacaatgacagcaccatgtcaacctcctccaatctggaaccatttgctaat
gatgatctgggcaacacagtgattcatttagacaaagctctggccaggattagggagtat
gagcgcatgaagcttaaagctgaatttaccccctgcaatggcagcactgcaggtgcagct
ggttctgatgccgcaattgctgaccatccttctgctaaccctgctgaaccagtggaagga
ggtgaagctggtgatgtgcactgtcctcagattgacacccagcagttggatcgtcagatc
aaagccatcatgacggaggtcattcctttccttaaggagaacatggacgaggtatgttcc
ctccagcttctaacatctgtacggcgcatggtcctcacgctcacccagcagaatgatgaa
agcaaagagtttgtccgctttttccacaaacagctgggtggcatcttgcaggactctctc
agtaaatttgtgggccgtactctgaaggactgcggggaggaccttttggtggaaatctca
gagattctcttcaatgaactggctttctttaagctaatgcaggatttggacagcaacagc
agcagcattgcactggcagccaaacacagaaataaaaagaggaccgagaaacccagaaca
aagaacagtcccagggaaaatccagtggctggatcgttttcgccagcatacacagatgaa
gacaaggaccaagatgaagctgagcaagcaggcgattctacccttcaggagctttacctg
cagacggagaaaaagaatagccagagcagtgaggcctcagacctggaggaggaagatgag
ggacatggacagagaatgcctctttcaatcagcctttccaaagcagagactcaggccctg
acgaactacggcagtggggaggatgagaatgaagaggaggaaatcgaggaatttgaggca
ggacctgtagaggtccaaacgtccctgcaggcttctgctgatggacagatggagcaggag
gggaccacagctactgaaggccaggagacaaaaactgaacagacgaattcagagaatgag
gaaattaaagtggcagttgaggctgtggattccacagtagacgaacaaaccacagtggag
agtcatgaggaagacagtaaaggtggggaagctgctgttgctgcttcagaagaaaatact
gtcttccacagtcaggacatctcaaaggagccgatgtccacgagcagccctgacaccgac
tcgcctgtcatgatcaatgtagatgagatgggctcaggtaacacaagccagaagtctgac
gaggaagactttgtcaaggtggaagatctgccactgcagctcacagtcatgtgcgaggag
gagcttcagaagaggatcgtcgaggagcaacagaataacaacctgtcggtagaaatcctc
aacggtaacaccggaccaatgactgggctggtgggaaatgctcaagccctgaaggaacca
gacaccactgattcgccgagtatctaa
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integrated database retrieval system
