Betta splendens (Siamese fighting fish): 114863883
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Entry
114863883 CDS
T08231
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03013
Nucleocytoplasmic transport
bspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114863883 (upf3b)
03015 mRNA surveillance pathway
114863883 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114863883 (upf3b)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
114863883 (upf3b)
mRNA cycle factors
P-body specific factors
114863883 (upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
114863883
NCBI-ProteinID:
XP_029020220
EnsemblRapid:
ENSBSLG00000024302
UniProt:
A0A6P7NQC3
LinkDB
All DBs
Position
10:14638406..14641754
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AA seq
462 aa
AA seq
DB search
MKEDKENTRPKEKRVEIRCEDAEKTERTKEKKEAMTKIVIRRLPPSLTKEELEEQLQPLP
EVDYMEFFSNDTSLYPHLFARAYINFKNQDDIVLFRDRFDGYVFIDNRGQEYPAIVEFAP
FQKVAKKRSKKKDAKCGTLTEDPDYKKFLEYYNGDDEKLTSTPETLLEEIEAKTKELIAK
RTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEERKKRKEADKMKRSDK
PLEKDKDQVKEEPKIKLLKKPDRGEEGDSEKPKEKAKKPERPNKEDRSAGSGDPKRRQNI
ENKEDRGRKIGEDGRKEFRERDADRDREREREREKERRQKEKERIRRQDEDRRRRRERQD
GENSFRKREEEVKKEKERAVEKKKGENGGEFTHSERPEKPAKDNKKEDSGKRERLRNKDR
PAIQLYQPGARSRNRTGGGADSNTADRKSESETKKVSDKGDD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggaaaacactcgaccgaaggagaaaagggtggaaataaggtgtgaa
gatgcagaaaagacggagaggactaaggaaaagaaagaggccatgacaaagattgtgatc
agacgattacctccaagtctgaccaaggaggagctggaggagcagttgcagcctcttcca
gaggtggactacatggagtttttctccaatgacaccagcctttacccacaccttttcgca
agggcttacatcaatttcaaaaatcaagacgacatagtcctcttcagggatcggtttgat
ggatacgtgttcatagacaacagagggcaggagtatcctgctattgtggaatttgcaccc
tttcaaaaggttgccaagaaaagaagcaagaagaaggatgcaaaatgtggaacacttact
gaagatcctgattacaagaagttcctagaatattataacggtgatgatgagaaattgaca
tctacacctgaaactttgttagaggaaattgaagctaaaacaaaagaacttattgcgaag
agaactacacctctgctggattttcttaaaaacaaacagaggatcagagaagaaaagaaa
gaagagagaagaagaagggagcttgaacgcaaacgtctgcgtgatgaggagcgtcgtaag
tggagagaggaggaaaggaagaaacgtaaagaggcagataagatgaagaggtctgataaa
cccctagaaaaggacaaggatcaagtgaaagaagaacctaaaattaagctcttaaagaag
ccagacagaggtgaggagggtgattctgagaagcccaaggaaaaggctaagaagcctgag
aggccaaataaagaggacagatctgctgggagtggtgatccaaagaggcgtcagaatatt
gagaataaggaggatcgtggacgaaaaattggcgaagacgggcggaaggagttcagggag
cgtgatgcagacagagacagagagcgtgaacgagagcgggagaaggagcgtcgccagaaa
gagaaggaacgcatcaggcgacaggatgaggaccgtcggagaaggcgagaacggcaggat
ggagagaactcgttcaggaagcgagaggaggaggtgaaaaaagaaaaagagcgcgctgtg
gagaagaagaagggtgaaaatggtggagaatttactcacagtgagaggccggagaaacct
gccaaagacaacaagaaggaagacagtggtaaaagagagcgactacgtaacaaggaccga
ccagccattcagttgtaccaacccggggccagaagccgcaatcgaactggaggtggagcc
gactccaacactgcagacaggaagtcagaaagcgagaccaagaaagtgtctgacaaagga
gatgattga
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integrated database retrieval system
