Betta splendens (Siamese fighting fish): 114865598
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Entry
114865598 CDS
T08231
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114865598 (trim71)
04121 Ubiquitin system [BR:
bspl04121
]
114865598 (trim71)
Enzymes [BR:
bspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114865598 (trim71)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114865598 (trim71)
Ubiquitin system [BR:
bspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114865598 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
zf-RING_5
zf-C3HC4
zf-RING_2
DUF4094
Motif
Other DBs
NCBI-GeneID:
114865598
NCBI-ProteinID:
XP_029022686
EnsemblRapid:
ENSBSLG00000002459
UniProt:
A0A6P7NS05
LinkDB
All DBs
Position
11:5899522..5923278
Genome browser
AA seq
832 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSSSSSQTTRRLHVLPCLHAFCR
HCLEGQRSPGDPLKLRCPTCDQKVSISEAGVDSLPSSNFLFNNLLDVVVSSEEQLHPKNG
HHHHHHHRGGLVGGSSGFHHSHAGLLQPHLLGEPQCSSCDEENPATSHCLDCQEYLCDNC
VRAHQRVRLTKDHFIERLGENLHLGNANSNPGQSGVSVCLAQSLQSNFALLSLFQDRMSF
CQHHDNEMFLFFCETCSVPICRECSMGHHMGHTFVYLQDAVQDCRAITIQLLADAQQGRQ
AVQLSMEKVQAMAEQVEIKAKVVQSEVKALVLRHKKALEERECELLWKVEKIRQVKAKSL
YLQVEKLHQSLTKLDSTIAAVSQVLDEGRHLDVLLARERMLTQIHELKALRSLLQPQEDD
RFMFTPPDQALYIAVQSMGLISSGAFAPVTKAHGEGLKSALRGKPASFTVIGYDHDGEPR
LSGGDAVSAIVMSITDGNLSAVEVTDHQNGSYTISYLPKYEGEHLVSVLVCNQHIQGSPF
KVVVKSGRSYSSLGSQVSSFGCEGEGDGQLCRPWGVSVDKEGYVVVADRSNNRIQIFKPC
GAFHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTK
NGQFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVAFN
HEDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVNQENRIIVADSRNH
RIQVFEPNGNFLCKFGTQGSGFGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatttccagactcggacctgcagacgtgcccgctctgcaaggagctctgcggc
tcctctgcgcccatctcctccagctcgtccacgtcctcgtcctcctcgcacacctcgtcc
tcctccagccagacgacccggaggctccacgtgctgccgtgcctccacgccttctgcagg
cactgcctcgagggccagcgcagccccggggacccgctcaagctgcgctgccccacctgc
gaccaaaaggtctccatctccgaggccggggtggactccctgccctcctccaacttcctc
ttcaacaacctgctggacgtggtggtgagctccgaggagcagctccaccccaagaacggc
caccaccaccaccaccaccaccggggcggtttggtcggaggctcctccggcttccatcac
tcgcacgcggggctgctgcagccgcatctgctgggcgagccccagtgcagctcctgcgac
gaggagaacccggccacctcccactgcctggactgccaggagtacctgtgcgacaactgc
gtgcgcgcccaccagcgggtgcggctgaccaaggaccacttcatcgagcgcctcggcgag
aacctgcacctgggcaacgccaacagcaaccccggccagtcaggtgtgtcggtgtgcctc
gcccagtccctgcagagcaacttcgccctgctgtcgctgttccaggaccgcatgagcttc
tgtcagcaccacgacaatgagatgtttctgttcttctgtgaaacctgctcggtgcctatc
tgcagggaatgcagcatgggccatcatatgggccacacctttgtttacctgcaagatgct
gtgcaggactgcagggccatcaccatccagctactggcggatgcacagcaggggcgtcaa
gctgtgcagctgagcatggagaaagtccaggccatggccgagcaggtggagatcaaagcg
aaggtggtgcagtctgaagtgaaggcgcttgttctcagacacaagaaagccttggaggag
agggaatgtgagctgctatggaaggtggagaagatccgccaggtgaaggccaagtctctc
tacctgcaggtggagaaactgcaccaaagcctgaccaagttggacagtaccatcgccgcc
gtcagccaggtcctggacgagggccgccacctggatgtgctactggccagggaacggatg
ctcacccagatccatgaactcaaagccttgaggagtttgctgcagccacaagaggatgac
cgcttcatgttcactcctccagaccaggctctgtacatagccgtccagtccatgggcctg
atcagcagtggagcctttgcccctgtcactaaagcccacggcgagggtcttaaaagtgca
cttcgtggcaaaccagcatcgtttacagtgatcggctacgaccatgacggtgagccgcgc
ctctccggtggagacgcggtgtctgctatcgtcatgtccatcacagatggaaacctgtct
gcagtggaggtaacggaccaccagaacggttcctacaccatcagctacctccccaaatac
gagggggagcacctagtgtccgtactggtctgtaaccagcacatccagggcagccccttc
aaagtagtggtgaagtcaggccggagctacagctcactgggctcccaggtgtcgtcgttc
gggtgcgagggcgagggagacggtcagctgtgtcgcccctggggtgtcagtgtggacaag
gagggatacgtggtggtcgctgatcggagcaacaaccgcatacagatattcaagccttgt
ggggcctttcatcataagtttggctctctgggctctcggcccggtcagtttgaccgtcca
gcgggggtggcatgcgacagtcagagacgcattattgtggccgataaggacaatcaccgt
gtgcaggtgtttactttcgagggccagttcctgctgaaatttggggagaagggtaccaag
aatgggcagttcaactatccttgggatgtggctgtcaactccgaaggcaagatccttgtc
tcagacaccaggaaccaccgtgtgcagctcttcgcgcctgacggctctttcctcaacaag
tatgggtttgaaggggccctttggaaacactttgactctcccagaggtgtagccttcaac
cacgaagaccacctggtggtgactgacttcaacaaccaccggctcctggtcattagaccc
gactgccagtctgcccgcttcctcgggtctgagggaactggaaacgggcaattcctccgt
ccgcagggcgtcgccgtcaaccaggagaaccgcatcatcgtggcggactcccgcaaccat
cgaatccaagtttttgagcccaatggaaacttcttatgcaaatttggtacacaggggagc
ggctttggtcagatggaccgcccctccggtgtagctgtgacgcctgatggagtcattgtg
gtcgttgactttggaaataatcgcatcctcaagttttaa
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