Bacillus subtilis subsp. subtilis 168: BSU13000
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Entry
BSU13000 CDS
T00010
Symbol
ykfD
Name
(RefSeq) oligopeptide transport ATP-binding protein YkfD
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
bsu
Bacillus subtilis subsp. subtilis 168
Pathway
bsu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bsu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSU13000 (ykfD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsu02000
]
BSU13000 (ykfD)
Transporters [BR:
bsu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BSU13000 (ykfD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_5
AAA_16
AAA_29
RsgA_GTPase
nSTAND3
DUF5906
AAA_13
AAA_18
AAA
Motif
Other DBs
NCBI-GeneID:
939863
NCBI-ProteinID:
NP_389183
Pasteur:
BG13234
UniProt:
C0SP98
A0A6M4JHB4
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Position
1368844..1369833
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AA seq
329 aa
AA seq
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MRRLPLLEVSQLKMHFDAGKKRTVKAVDGVTFQIREGETFGLVGESGCGKSTLGRVLMRL
YQPTEGSVTYRGTNLHALSEKEQFAFNRKLQMIFQDPYASLNPRMTVREIILEPMEIHNL
YNTHKARLLVVDELLEAVGLHPDFGSRYPHEFSGGQRQRIGIARALSLNPEFIVADEPIS
ALDVSVQAQVVNLLKRLQKEKGLTFLFIAHDLSMVKHISDRIGVMYLGHMMEITESGTLY
REPLHPYTKALLSSIPIPDPELEDKRERILLKGELPSPVNPPSGCVFRTRCPEAMPECGE
SRPQLQEIEPGRFVACHLYRNAETKEKVR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgactgcctttgttagaggtcagccagctgaaaatgcattttgacgcagggaaa
aagcggacagtcaaagctgtcgacggggtcacctttcagattcgtgaaggagaaacgttc
gggctagtcggggaatcagggtgcgggaaatcaaccttggggagagtgctgatgcgcctt
tatcagccgacagaaggaagcgtgacataccgcggcacaaatcttcatgcactaagtgaa
aaagagcagtttgccttcaaccgcaaactgcagatgatttttcaggacccttatgcttca
cttaacccgcgcatgaccgttcgagaaattattttggagccgatggagattcataatctc
tacaatacccataaagcacggcttctcgtcgtggacgagctgcttgaggcagttgggctt
caccccgattttggcagccgttatccgcatgaattcagcggcgggcaaaggcagagaatc
gggattgcgagagcactgtcgctgaatcctgaatttatcgtggcggacgaaccgatttct
gcacttgatgtctctgttcaagcgcaggtggtcaacctgctgaagcggcttcaaaaagag
aaagggcttacgtttttattcattgcccatgatctttcgatggtgaagcatatcagtgac
aggatcggtgttatgtacttaggacacatgatggaaattacagagagcggcaccttgtat
cgtgaaccgctccatccctatacaaaggcgcttttgtcctcgattccgattccagatcct
gaattggaggacaagcgtgagcgtattctcttgaaaggggagctgccgagcccggtcaat
ccgccaagcggctgcgtgtttcgtacccgctgtccggaggcgatgcctgaatgtggagaa
tctcgtccccagcttcaagaaatcgaacccggccgttttgtcgcttgccatttgtatcga
aatgctgaaacgaaggaaaaagtaagataa
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