Bacillus subtilis subsp. subtilis BAB-1: I653_06875
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Entry
I653_06875 CDS
T02520
Name
(GenBank) ATP-dependent DNA ligase subunit
KO
K10979
DNA end-binding protein Ku
Organism
bsy
Bacillus subtilis subsp. subtilis BAB-1
Pathway
bsy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
I653_06875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsy03400
]
I653_06875
DNA repair and recombination proteins [BR:
bsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
I653_06875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF1631
DUF6058
Motif
Other DBs
NCBI-ProteinID:
AGI28631
LinkDB
All DBs
Position
complement(1370320..1371204)
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AA seq
294 aa
AA seq
DB search
MHTMWKGSISFGLVNIPIKLYAATEDKDIKLRSLHKEDHAPIKYEKVCTNCEKTLSPDEI
VKGYEYVKGKYVVLTDEDLKSLKQEHEEKAVEIVDFVLLQEIDPIYFNRSYFVGPGDNGT
KAYTLLREALRSTGKIGIANMTIRSKQQLAILRVYENCIVMESIHYPDEVRSAAHVPGVP
DQSNVNDKELQTAITLIDQLTAEFEPEKYEDTYRQALLQRVNDKLENKETAVTPDKAPPR
EDVIDLVSALQASIDRTRRPNRETPAATPAQAAEPKGAGDKKQKTTRKKASGTS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaatgtggaagggatcgatcagctttggattagtaaacatccccatcaagcta
tatgcggccacagaagataaagatattaaactgcgcagcctccataaagaggatcacgca
ccaatcaaatacgagaaagtttgcacaaattgcgaaaaaactcttagtcctgatgaaatt
gtgaagggatatgaatatgtaaaagggaaatatgtagtgctgacggacgaagatttaaaa
agcttaaaacaggagcatgaggagaaagcggttgagattgttgactttgttctgctccag
gaaattgatccgatttattttaaccgctcctactttgtcggccccggggataatgggacg
aaggcctataccctgctgcgtgaggcgctgcgctcaaccggaaagatcggtatcgccaat
atgacaatcaggtcaaagcagcagctggcgattctccgtgtgtatgaaaattgtatcgtc
atggagtctatccattatcccgatgaggtcagaagcgccgctcatgtcccaggtgtacct
gatcaatcgaatgtaaacgataaggaactgcaaaccgctatcacattaatagatcaactg
actgctgagtttgagcctgagaaatatgaagacacgtaccgacaggcgctgctgcaaaga
gtcaacgacaagctagaaaataaagaaacggccgtcactcctgataaagcgccacctcgt
gaagatgtcattgacctggtaagcgctctgcaagccagcattgacagaaccagaaggccg
aaccgggagacaccggctgccacacctgcacaagccgctgaaccgaaaggagccggagat
aaaaaacaaaaaacaactagaaaaaaagcctccggcacgtcatag
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