Bos taurus (cow): 100138748
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Entry
100138748 CDS
T01008
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
bta
Bos taurus (cow)
Pathway
bta03013
Nucleocytoplasmic transport
bta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100138748 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
100138748 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
100138748 (THOC1)
03041 Spliceosome [BR:
bta03041
]
100138748 (THOC1)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100138748 (THOC1)
Spliceosome [BR:
bta03041
]
Complex C
Other components
EJC/TREX
100138748 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100138748 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
100138748
NCBI-ProteinID:
NP_001192409
BGD-bta:
BT26111
Ensembl:
ENSBTAG00000019215
VGNC:
35840
UniProt:
F1MJV3
LinkDB
All DBs
Position
24:complement(35184721..35223401)
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AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNSKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVERNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDSKPTRAVRKRAAPE
DFLGKGPSKKILMGNDELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ESEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGDQIEVFANKLGEQWKVLAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggtttactaaatct
acgagagaggccctgaacagcaaaaatatcaagcccttgttgaatacctttagccagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaggcttttagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtacggcatctacaccttttgtgttgttgggagatgtt
ttggactgtcttcctttggatcagtgtgacacaatattcacttttgtggaaagaaatgtt
gctacttggaaatcaaatacattctattctgctgggaagaattatttactacgtatgtgc
aatgatctcctacgaagattatcaaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcacattgggtcag
aagcacacagaggacagagaagaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgattacaacctgtaccgaaaattttggtca
cttcaggattactttagaaaccctgtgcaatgctatgagaaaatctcatggaaaactttt
ctcaagtattctgaagaagtcctagctgtttttaagagttataaattagatgatactcag
gcctcaaggaaaaagatggaagaattgaaaacaggaggagagcatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacagctgagtgacagtaacttccgtcgacac
atcctgctgcagtatctcattttatttcagtatctcaaggggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagacagcaagcccacaagagcagtacggaaaagagcagcgccggag
gacttcctgggcaaagggcccagcaaaaaaattctgatgggcaatgatgagttaacaagg
ctttggaatctctgtcctgacaacatggaagcctgtaaatcagagacaagggaatacatg
ccaactttggaggaattcttcgaagaagccattgaacaggcagaccctgaaaacatggtt
gaaagtgaatacaaggctgtgaacaactcaaattatggttggagagccctaagactgtta
gcacggagaagccctcacttcttccagccaaccaaccagcagtttaaaagtttgccagaa
tacctcgaaaacatggtaataaagctagccaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagacaatgatgctttactgaaggaaaatgaaagt
cctgatgttcggcgagacaaacctgtaacaggggaccaaatagaggtatttgccaacaaa
ctgggtgaacagtggaaagtcctggctccttacttggaaatgaaagactcagaaattaga
cagatcgagtgcgacagcgaagacatgaagatgagagccaaacagctgcttgtggcctgg
caggaccaggagggagtgcacgcaacacccgagaacctgatcaacgcgctcaacaagtct
gggctaagtgacctcgcagaaagtctaactaatgacaatgagacaaacagttag
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