Bos taurus (cow): 524683
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Entry
524683 CDS
T01008
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
bta
Bos taurus (cow)
Pathway
bta03250
Viral life cycle - HIV-1
bta04623
Cytosolic DNA-sensing pathway
bta05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
524683 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
524683 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
524683 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bta03400
]
524683 (SAMHD1)
DNA repair and recombination proteins [BR:
bta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
524683 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
524683
NCBI-ProteinID:
NP_001069329
BGD-bta:
BT20536
Ensembl:
ENSBTAG00000022007
VGNC:
34277
UniProt:
Q0VCA5
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Position
13:complement(65915450..65982707)
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AA seq
589 aa
AA seq
DB search
MQSADSQNTPKRPRRDGSPRTPPDSPLADAETSPSHDLDPDYRTWGPEQVWSFLRRCGFS
DSELLKRCREKRMSGSLLPFPEDLGISSHGKKMKLLNCIQDTMKVINDPIHGHIEFHPLL
MRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGRLVRELSEKQPELQIS
ERDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEIKWTHEQGSVMMFEHLINSNGLQD
VMKYYGLIPEEDILFIKEQITGPPESPIKDASKWLYKGRPKEKSFLYEIVANKRNGIDVD
KWDYFARDCHHLGIQNSFDYKRFLKFARVCEVDNMKHICTREKEVGNLYDMFHTRNCLHR
RAYQHKVGNIIDTMITDAFLKADDHIEITGSAGRKYHISTAIDDMEAFTKLTDNIFLEIL
YSTDPNLNDARMILKKIESRNLYKFVGETQPMIQRIKKENYEHLPNEVASAKPSDVELEA
ELKAEDLIVDVINMDYGMEDKNPIDHVRFYCKSDLSKAVMITRNQVSQFLPETFAEQLIR
VYCKKTDEKTLFAARQHFVHWCLINDFTKPQIKKLPLRKLKKELTTATG
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgccgactcccagaacacccccaagcggccccggcgcgatggcagcccaaga
acgccgccagactcccctctcgcagacgcagagacgtccccgagccacgatctcgacccg
gactaccgaacctggggcccggagcaggtgtggtccttcctaaggcgctgtggcttcagc
gattcggaactgctgaaacgctgccgagagaagagaatgtcaggttcgttactgcccttt
cctgaagatcttggaataagttcccatgggaagaaaatgaagctgcttaattgtatccaa
gatacaatgaaggtgatcaatgatcctatccatggccacattgaatttcaccctctcctc
atgcgaatcatcgacacaccacaatttcagcgcctgcgatacatcaagcagttgggaggc
ggttactatgtttttccaggagcttcacacaatcgatttgagcacagtctaggcgtgggg
tatctagcaggacgtctagttcgtgaactgagtgaaaaacaaccagagctgcagataagt
gaacgagatattctctgtgttcagattgctggtctttgtcatgatcttggtcatgggcca
ttttctcatatgtttgatggaagatttattccacttgctcgaccagagataaaatggacg
catgaacagggctcagttatgatgtttgagcacctcatcaattctaacggactccaagat
gtcatgaaatactatggtctcatccctgaagaagatattttgtttatcaaggaacaaatt
acaggaccacctgaatcacccatcaaagatgcttcaaagtggctctataaagggcgtcct
aaagaaaaaagcttcctttatgagatagtggccaataaaagaaatggcattgatgtggac
aaatgggattattttgccagggactgccatcatcttggaatccaaaatagctttgattac
aagcgctttcttaagtttgcccgtgtctgtgaagtagataatatgaagcatatttgtact
agagaaaaggaggttggaaacctgtatgacatgttccacacacgcaactgtttgcaccgc
agagcttatcaacacaaagttggcaacatcattgatacaatgattacagatgccttcctc
aaagcagacgatcacatagagataacaggttctgcaggaagaaagtatcacatttctaca
gcaattgatgacatggaagccttcactaagctgacagataacatttttctggagatctta
tactccactgatcccaacctgaatgatgcacgaatgattttaaagaaaattgaatcccgt
aatctatacaagtttgtgggtgagactcagcccatgatacaaagaattaaaaaggaaaac
tatgaacaccttccaaatgaggtcgccagtgctaaacccagtgatgtagagctagaagct
gaactgaaggctgaagatttgatagtggatgttatcaacatggattatgggatggaagac
aagaatcctattgatcatgttcgcttctattgtaagagtgacctcagcaaggcagtcatg
attactagaaaccaggtttctcagtttttgccagagacatttgctgagcagctgattcga
gtttactgtaagaagacagatgaaaagactctgtttgctgcacgacagcatttcgtccat
tggtgcttaatcaatgacttcaccaagccacagataaagaaactgccactcagaaaattg
aagaaggagctaaccacagccacaggataa
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