Bemisia tabaci (sweet potato whitefly): 109033521
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Entry
109033521 CDS
T06019
Name
(RefSeq) regulator of nonsense transcripts 3A-like
KO
K14328
regulator of nonsense transcripts 3
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03013
Nucleocytoplasmic transport
btab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109033521
03015 mRNA surveillance pathway
109033521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109033521
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109033521
mRNA cycle factors
P-body specific factors
109033521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
109033521
NCBI-ProteinID:
XP_018901730
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MTEGVKKANSASSRDNEVSSGGNSKKKAKGEKFPTKVVVRKLPPSMNLESFLDNVSPLPD
NDYINFVPADNSLFPLNYSRGYINFSNQEDLLIFTQKFDNYVFVDAKGHEYPALVEFAPF
QRIPKVKTNKKKDSKCSTIEDDPHYIKFKERLLAEEEENESGKQNVFETTLPDDVPEKVT
STPLLDYLRKRREEKKRIREEKKEERKKRELERRKVKDEQRKAKKVASTVSTSVTVSVPS
DTYEPVETSAMNSASAGLKEKDRIKDKDPLGKRGAKDLLKAIKVKEKLNSISKDKEKSGK
SYREERLRRIEQREELRKKNSKTGDSNETINQESGDKDKKIDNSSTHSQHDDKEDKYKKQ
KPKIDSFQKPRKKEFEKRSSEYYKGKKEFQSDKPKKKILVHKPQDGSSVSENKENNSNCD
KGKEGESEEAPEKQGAKLKSGIGSQDSVGKSGETEKKDKPSKDSDSIQKKSKSQDTSVKP
SSSVKKKAENDKEQSKKTSESSTSLTNAKNSEDSSVKPLEHKKISKNQSSSLGNSTEGDI
SPVSKPERRRSLESQDSVQDSDSQSRKDPRTERRIRNKDRPALEIYRPGMGRYSKQRLEK
VLGSSTERDTPSPSPSITSN
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaggtgtcaagaaggcaaattcagcctcctcgagagataatgaagtttcttca
ggagggaattccaagaaaaaagcgaaaggggagaaatttccaaccaaagttgttgtccgg
aaattgccaccttctatgaatttagaatcatttttagacaatgtgtctccattaccagac
aatgattacattaattttgtgcctgccgataattcactcttccccctcaactattctaga
ggatatatcaatttttccaatcaagaagacctactcattttcactcagaaatttgataac
tatgtttttgtggatgccaaaggacacgagtatccagctttagttgaatttgcacccttt
cagagaatacctaaggtgaaaacaaacaagaaaaaagacagtaaatgcagcacaatagaa
gatgatcctcactatatcaaattcaaagaacggttgctagcagaagaagaagaaaatgag
agtggcaaacaaaatgtttttgaaacaactttgcctgatgatgtccctgagaaagtcaca
tcaacgcccttacttgactatctccgcaagagacgagaagaaaagaaaagaattcgtgaa
gagaaaaaggaggaacgcaagaaacgggaattagaaagaagaaaagtgaaggatgaacaa
cggaaagccaaaaaagtggcttccacggtttcaacatcagtaactgtttctgttccgtct
gatacctatgaaccagtggaaacttctgcaatgaattctgctagcgctggtttgaaggag
aaagaccgaatcaaggataaagatcctcttggaaaaagaggagccaaagatttgttgaaa
gctatcaaagtaaaagaaaaactaaattcaatttcgaaggataaagaaaaatctgggaaa
agctatagagaggaaagattacgccgaatcgagcagcgtgaggagctgcggaaaaaaaac
tcaaaaactggtgattcaaatgagaccattaatcaagagtctggtgataaggataaaaag
attgataattcttcaacgcacagtcaacatgatgacaaagaagacaagtacaaaaagcaa
aaaccgaaaatagacagtttccaaaaacccagaaagaaagagtttgaaaaacgaagtagt
gagtattacaaaggaaaaaaagaatttcaaagtgataagcccaagaaaaaaatacttgtt
cataaacctcaagatggctcaagtgtttcagaaaataaagaaaataattcaaactgtgat
aaaggtaaggagggcgaatcggaggaggctccagaaaaacagggagctaaattaaaatca
ggcattgggtcccaggactcggtcggaaaatctggagaaaccgaaaaaaaagataaaccc
tctaaagactcagactctatccagaaaaaaagtaaatctcaagatacctcagtgaaacca
agtagttctgtcaaaaagaaagcagaaaatgataaagaacaatcaaaaaagacgagtgaa
tcctccacctccttgacgaatgctaaaaactctgaagactcttcagttaaaccactagag
cacaagaaaatctctaaaaaccagtcctcatctctaggaaattccacagaaggagacatt
tctcctgtgtcgaaaccagaacggagaaggtcacttgagtcacaagattcagttcaggat
agtgattctcaatcaaggaaggatcccagaactgaaagacggatcagaaacaaggaccga
ccagcgctggagatttatagacctggaatgggtagatacagcaagcagaggttagagaaa
gttttagggagcagcaccgagcgcgataccccctctccaagtccgtcaatcacatctaac
taa
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