Bemisia tabaci (sweet potato whitefly): 109036851
Help
Entry
109036851 CDS
T06019
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
109036851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btab03400
]
109036851
Enzymes [BR:
btab01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
109036851
DNA repair and recombination proteins [BR:
btab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
109036851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
LIG3_BRCT
mRNA_cap_enzyme
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
109036851
NCBI-ProteinID:
XP_018906803
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MVDYSTAACMSDIIPFSDLCRFCDKLSSSEWKKRGDILLRYIQYFREFSAKVKKINPGIN
DSFYPVMRLLVPSLDRERGPYGIKEVKLAQIYVRILCLAKDSRDASKLQHFRNPSKAGKA
AGDFADVIYDVLKSRISSNENLKISDVNQHLDNIANKNASNDPRGIDDELTILMRKMSAS
EQKWLVRMLLKDMKLGIGNNKILSTFHRDAVDLYDVSNCLKKVCSTLKDRNTHLHEIEVC
LWDKFRPMLAQRCDVQNVDKDLPRQEYYLVEPKWDGERFQLHYGDGKFKYYTRKGFDYTN
TYGENASQGNLSPYLSKQFLPSVKNCILDGEMMCWNSRMKNFTTKGAEIDVKMLKVGNVH
NPCFCAFDILLLNDQVLTNMPLHDRVAILNRVFTPVEGIFMNTVRSKVTDKGEILSALNR
AIDNFEEGIMIKNPFSVYKPNSRKDGWYKIKPEYTEGSMIELDVLIIGGYYGGEGRWRTA
VTHFLYALAAPSSIPGENPTEFHSFGRVGSGCTQEELSELGAKLAPHWRRVKTGIMPPNI
IWTKEKPDLWIEPKNSIILQVKATEAVPSDSFHVGHTLRFPRIQKVRDDKPWTDCLTVPE
FFKILESSKGKLVSGHILATMSPLKKRAKKTIQQKPSLGSEFRSADVNNIEKLSSIFKGK
EFCIFIDKEQKQEVETKIVQHGGNIAQNPGSDTFCIVTSNPKQLRIKNLIKVGDYTIAKL
DWLERCFTEVKLIQWTPNDLIFMGKQAKEDLKYKYDQFSDSYVEFATESSLKETILAMRL
YDDKIVFGMPKQMLQFEKKVLNKTCPYSFFRQCRAFFGIPADGLSSLNPEFETARLDFAF
YGGILEKEISDSTTHTIYPSKHPENIRVLNSLKQARKFNYQIVSEKWVESCIEEKRMIDA
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggtagactacagcacagccgcttgtatgagtgatatcatcccatttagtgatctttgt
cgattctgtgataaactgagttccagtgagtggaagaaacgaggagatattttgcttcga
tacattcaatactttcgtgagttctcagctaaggtgaaaaaaatcaatccaggaatcaat
gacagtttttaccctgtgatgcggcttctagttcccagtttagatagagaaagaggtccc
tacggcataaaggaagtgaaactagctcagatatatgttagaattctctgtcttgctaaa
gacagtagggatgcttccaaacttcaacacttcaggaatccgtcaaaagctgggaaagct
gctggtgattttgctgatgtcatttatgatgttttaaagagtcgaatttcatctaatgaa
aacctcaaaatttcagatgtgaatcaacatttggataacattgcaaacaagaatgcatca
aacgaccccagaggcatcgatgatgagctgaccatactaatgaggaaaatgtcagcaagc
gaacaaaaatggttggtgcgaatgctgttgaaagatatgaaactaggcattggaaacaac
aaaatcctatcaactttccacagggatgctgttgatctatatgatgtctctaactgttta
aaaaaggtttgcagcactctgaaagatcgcaatactcacctccatgaaatagaggtttgt
ttatgggataagtttcgaccgatgctcgctcaaagatgcgatgttcaaaatgtagataaa
gacctccccaggcaagaatactatcttgtagaacccaagtgggacggtgaacgatttcag
ttgcattatggtgatgggaaattcaagtactataccaggaaaggttttgactacacaaat
acctatggagaaaacgcctctcaaggaaacctctcaccttacttatccaaacagttcttg
ccatctgtgaaaaattgtattttagatggggaaatgatgtgttggaactcaagaatgaaa
aacttcacaactaaaggagctgaaatagatgtaaagatgcttaaggttggaaacgttcat
aatccctgtttctgtgctttcgatattttattgctcaacgaccaggttttgaccaacatg
ccactgcatgatagagttgccatactgaatagagttttcacgcctgtggaaggaatattc
atgaacactgtccgcagcaaagttaccgacaaaggagaaatcttaagtgcattgaatcga
gccatagataattttgaagaaggaatcatgataaaaaacccattctccgtgtacaaacca
aactcaaggaaagatggctggtacaaaatcaaacctgagtacactgaaggcagcatgatt
gagttggatgttctaatcattggaggttactatggaggagagggaagatggagaacggct
gtcactcatttcttatatgcactcgctgcgccatcatccattcccggtgaaaaccctaca
gaattccattcttttgggcgggttggatctgggtgcacgcaggaagagttatcggagctt
ggagctaaacttgcgccccactggaggagagttaaaactggaatcatgccaccaaatata
atttggaccaaagaaaaaccagatctatggattgaaccaaagaattccatcatattacag
gtaaaagccactgaggctgtaccgagtgattcatttcatgttggccacactttgcggttt
ccaaggattcaaaaagtaagagacgataaaccctggacagattgtttgacagttcctgag
ttctttaaaatcttggagtcatcaaaaggcaaacttgtctccggtcacatattggctaca
atgtctcctctcaagaaaagggccaaaaaaacgatccaacaaaaaccgagtttaggaagt
gaattccgctccgctgatgtaaacaatattgaaaaactctcttccatcttcaaaggcaaa
gaattttgcatttttattgacaaggaacagaagcaagaagttgagacgaaaatagtacag
catggtggcaacattgcacaaaacccaggctctgatactttctgcattgtcactagtaat
cccaagcagttgcggatcaagaatctcataaaagttggcgactacaccattgccaagctt
gattggttggaaagatgtttcactgaagtcaagctcatccagtggactccaaatgattta
atattcatgggcaagcaagccaaagaagatctcaagtataaatatgatcagttctctgac
agttacgttgagtttgccaccgaaagtagcctgaaagaaacaattcttgcaatgcgactt
tatgatgataagatcgtttttggaatgcccaagcagatgcttcagtttgaaaagaaggtg
ctcaataaaacctgtccttactcatttttcagacagtgtagagcattttttggcataccg
gcagatggactcagttctttaaatcctgaattcgagaccgccagactcgacttcgcattc
tatggtggaatcttggaaaaagaaataagtgactccacgacccacactatttatccttct
aagcatccagaaaacattcgtgttctaaattctctcaaacaagcaaggaagttcaattat
cagatagtcagcgaaaagtgggttgaaagctgtattgaagaaaaaaggatgattgatgcg
taa
DBGET
integrated database retrieval system
