KEGG   Bemisia tabaci (sweet potato whitefly): 109038224
Entry
109038224         CDS       T06019                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
btab  Bemisia tabaci (sweet potato whitefly)
Pathway
btab03030  DNA replication
btab03410  Base excision repair
btab03420  Nucleotide excision repair
btab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:btab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109038224
   03410 Base excision repair
    109038224
   03420 Nucleotide excision repair
    109038224
   03430 Mismatch repair
    109038224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:btab03032]
    109038224
   03400 DNA repair and recombination proteins [BR:btab03400]
    109038224
Enzymes [BR:btab01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     109038224
    6.5.1.6  DNA ligase (ATP or NAD+)
     109038224
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     109038224
DNA replication proteins [BR:btab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    109038224
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     109038224
DNA repair and recombination proteins [BR:btab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     109038224
   NER (nucleotide excision repair)
    Other NER factors
     109038224
   MMR (mismatch excision repair)
    Other MMR factors
     109038224
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 109038224
NCBI-ProteinID: XP_018908753
LinkDB
Position
Unknown
AA seq 1122 aa
MFMHFRALLQVSPKMAQRSITSFFTKSPVASKKPVVASFGSDSPKKSNGTAIEDSPIKAT
TKRKRVAAIESDSEDEAKPGPSSKSSPVSKKVAQDKKEESPEPSSSKSVKNVTDKSPRKS
SPASTPAETQEKTSKSPLSTYERKTANVKKYKGPGLLPGIAKVLEEARKKDEALSKTFDA
LKNSPATEDASSSAAQDALMSDVKEKTNIPKDNDKTVKAEEEVSDEENVSKVDKTWTEYE
KELNENFELMQKARKALHSYNRKNDIACAKLMAGSLSDKDYQPNDAEEVAILDYVTDRIL
GKKCKADIAAMAFIEPRNSLDRLLCGIDEAASKLKSPQSSSKKGASTPKTTSAKTSKTKT
SSTKKVSKTKAESAKRRKPGETIADKQKRLKEEKEEKKEEEKENKSEKDEDDKAGKEETK
NSKTPKKMHSFFAPKGGGKECEQKDSSAETSPQGKGATLVSTKIPGANYDPSKEKYHPID
DATWKQNEKVPYMALACTLTAIEGVSARLKMISILANYFRSVIVLSPDDLLPSVYMCLNQ
LGPAYAGIELGVAESYLMKAIAQCTGRSVPQIKSDAEKFGDLGIVAEQSRSNQRMMFQPA
PLTVRGVFEKRKDIALMTGHATMTKKIDKIQSMFVACRHTEARFLIRSFAGKLRIGLAEQ
SVLQALASACTNTPPNQEYPPEKISVAQKLSPEAFKELVEEEAQVLKTTYCECPNYDMII
PVILKHGIKALPEHCKLTPGIPLKPMLAQPTKGASEVLTRFEGLKFTCEYKYDGERAQIH
LQEDGKISIYSRNQENNTSKYPDIISRLKAALGPEVKSCVLDTESVAWDRENKKIMPFQV
LSTRKKKDANEADIKVQVCVFMFDLLYLNGKPLIREPFIERRRLLRENFKEVEEQFLFAK
SLDTNVLEEMQEFLEESVKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDGCGDTL
DVVVIGGYLGRGKRTGVYGGFLLACYDADNEEYQSICKIGTGFSDEMLVQHSEFLKNHKI
HEPKSYYRYDSSLEPDHWFDAVQVWEIKCADLSLSPIHRAAIGIVDPEKGISLRFPRFLR
IRDDKSAEDATNAQQVADLYKNQDQIKNQEGQGKKVSEEDFY
NT seq 3369 nt   +upstreamnt  +downstreamnt
atgtttatgcattttcgcgcccttctacaagtttcgcctaaaatggcacaacggagtata
acgtctttctttacgaaaagccctgtggcctctaaaaaaccagttgtagcatcttttgga
agtgattctcccaaaaaatcaaatggaactgccatagaggactcgccaataaaagctacc
accaaaagaaagagggttgccgcaattgaaagtgacagcgaagatgaggcaaagcctgga
ccctcctcaaaaagctctcctgtcagtaagaaggtagctcaagataagaaggaagagtct
ccagaaccgtcttcttcaaaatcagtgaaaaatgtcacagacaagtctcccagaaaatca
tctcctgcttctacgccggctgagacacaggagaaaacctcaaaatcgccactttcaact
tatgaacgaaaaacagcaaatgttaaaaagtacaaaggacctggtctcctgcctggaatt
gcgaaagttttggaagaagcgaggaagaaagatgaagctttatcaaaaacctttgatgcg
ttgaaaaactcaccagccactgaggacgcttctagtagtgcagcacaagatgctctgatg
agtgatgtgaaagagaaaactaatattccaaaagataatgataaaactgttaaagcagag
gaggaagtttcagatgaagaaaatgtttcaaaagtcgataaaacatggactgaatatgag
aaagagctcaatgaaaattttgaactcatgcaaaaagcacgcaaagcgttacattcctac
aacaggaagaatgatatcgcctgtgccaaattgatggcaggctcattgtcagacaaagat
taccagccaaatgatgcagaagaggttgccatcttagattatgtcacagataggattttg
gggaagaagtgtaaggcggacatagccgctatggcattcattgaacctcggaattcctta
gatagactcctctgtggtatagatgaagctgcatctaaattaaaaagtcctcagagcagc
agcaaaaaaggagcatcaacgcctaagactacatctgctaaaacatcaaaaaccaaaact
tcgtccacaaagaaggtatctaaaacaaaggcggagagtgctaaaagacgtaagcctgga
gaaacaattgctgacaagcagaagcggctgaaggaagaaaaagaggaaaagaaggaagaa
gaaaaagagaataaatctgaaaaggatgaggatgacaaggctggtaaagaagagacaaag
aacagcaaaactcccaaaaaaatgcatagcttttttgctcccaaaggaggtggcaaagaa
tgtgaacagaaagactcctcagctgaaacttctccacaaggcaaaggagccaccttagta
tcaaccaaaattcctggtgctaattacgatccatcaaaggaaaaatatcatccaatcgat
gacgcaacttggaaacagaatgaaaaagttccttatatggcccttgcttgtacattaact
gctatcgaaggagtctctgcaagactgaaaatgatcagtatactagccaactatttccga
tctgtgattgtcctctctccagatgaccttttgcctagtgtttacatgtgtttgaatcaa
ctcgggccagcttatgctggcatcgaacttggagttgcggaaagttatttaatgaaggct
atagcgcagtgcacagggcggtcagtacctcagatcaaatctgacgcagagaaatttggt
gatttaggaatcgtcgctgaacagagtcgaagtaatcagaggatgatgtttcaacctgca
cctttaaccgtgagaggtgtttttgagaagaggaaggatattgctttaatgactggacat
gctacaatgacaaagaaaatagataaaattcaaagtatgttcgtagcctgtcgacacaca
gaagccagatttttaatacgatcatttgctgggaaactgaggattggcctagctgaacaa
tcagtgcttcaggcattagcgtcggcgtgcacaaacacacctccaaatcaagaatatccg
ccagaaaaaatatccgttgcccagaaattatcacctgaagcattcaaagaacttgtcgaa
gaagaggctcaagtcctcaaaactacatactgtgagtgtccaaattatgacatgataatt
cctgttattctcaaacacggtatcaaagctctaccggaacactgcaaattaacccctgga
attccgctgaaacctatgttggctcaacctaccaaaggtgctagtgaagtactcacccgc
tttgaaggactcaagttcacatgtgaatacaagtatgatggagaaagagcccagattcac
ttacaagaagatggcaaaattagtatttacagtcggaatcaagaaaacaacacatcaaaa
tatccagacatcatatcaaggctgaaggcagccttgggtcctgaagtcaaatcgtgtgtc
ctagacacagagtcggtagcatgggatagagaaaataagaaaattatgcctttccaagta
ctcagtacacgtaaaaagaaggatgctaatgaggctgatatcaaagttcaagtttgtgta
ttcatgtttgatttgctgtatttaaatgggaagcctctcattcgagaaccgttcatcgaa
aggagacgattattaagggaaaattttaaagaggtcgaagagcagtttcttttcgcaaag
tcattagacactaatgtattagaagaaatgcaagaattccttgaggagtctgtcaaaggt
aactgtgaaggattaatggtgaaaacattagaagaagaggcaacatatgaaatagctaaa
cgatcaagaaactggttaaaactcaaaaaagattaccttgacggctgcggtgatacttta
gatgtagtcgtgatcggtggatatcttggccgcggcaaacggactggagtctatggaggc
ttcttgcttgcttgctacgatgctgacaacgaagaatatcagagcatatgtaaaattggc
accggtttctcggatgaaatgttggtgcaacactcagagttcctaaagaatcacaagatc
catgagccgaaatcctattaccgctatgattcgtcattggagccggatcattggtttgat
gctgtccaagtatgggaaatcaagtgtgcagatctctcattatctcccattcatcgagca
gcaattggaattgttgatccagaaaaaggtatttctttaaggtttccaaggtttctgagg
atccgtgacgacaaatcagctgaagatgccactaatgctcagcaggttgcagatctgtac
aaaaatcaagatcaaataaagaaccaagaaggacagggtaaaaaagtttcagaggaagat
ttttattaa

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