Bemisia tabaci (sweet potato whitefly): 109043631
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Entry
109043631 CDS
T06019
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109043631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
btab03041
]
109043631
Enzymes [BR:
btab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109043631
Spliceosome [BR:
btab03041
]
Complex A
U2 snRNP components
U2 related factors
109043631
Complex B
109043631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
109043631
NCBI-ProteinID:
XP_018916457
UniProt:
A0A9P0F136
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MARSGHHKRKSRSRSRSRSRDRKERRRRSRSRERSRRSRSRSRDRKEKKSTKRDKSPSRN
RKHSRSRSPREKILKKEDVKKEISKPEEEAFDPSNLDKEEEQKRLEQEMLKRRDRIERWR
AERKKKEMEGVRKDIKTSIASLQLPSKKWNLEDDSDEEEDKKEENGGKKEEEEEIDPLDA
YMMDIQEEVRKVNKMDGTTKAVDTAQTKNSTGVVIVTGVAKKKADTNKGELIEQNQDGLE
YSSEEEQEDLTATAANLARTQKKELAKVDHSGINYLPFRKSFYVEVPEISRMTDAEVEAY
KVELEGVRVKGKGCPRPIKTWAQCGVSKKVLEILKKHEYEKPTPIQAQAIPAIMSGRDLI
GIAKTGSGKTLAFVLPMLRHILDQPPLEDTDGPIGLIMAPTRELCMQIGKDIRKFSKSLN
LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGKVTNLRRVTYVVLDEADR
MFDMGFEPQVMRIVDNVRPDRQLVMFSATFPRQMEALARRILNKPIEVQIGGRSVVCKDV
EQHVIVLDEDQKFLKLLELLGNYLDQGSAIVFVDKQENADTLLKDLMKASYPCMALHGGI
DQYDRDSNIVDFKTGKVKLLIATSVAARGLDVKSLILVVNYDCPNHYEDYVHRCGRTGRA
GNKGYAYTFLTPDQEQHAGDIIRAFELSGLPVPPQLIKMWDCYRAKQAAEGKKVHSGGGF
SGKGFKFDETEAAIANEKKKFQKAALGLQDSDDEDIEGDIDQQIEQILASKRTVKEIKAP
IASINPETQQIIQNNQPMTERLELAKKLASKIHIAKNLGAEAKGATQQAAEAILKGGGSQ
PIIMARTVAEQLAAKLNTKLNYQPKEEEEVKEEEVEQVETFCKYEEELEINDFPQQARWR
VTSKEALAQISEYSEAGITVRGTYFPQGRNPPEGERKLFLAIESTNELAVSKAKIEITRL
IKEELLKLQSSAHHMINKARYKVL
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaagtggtcaccataaacgtaagtctagatccaggagtaggagtagatctaga
gatagaaaagagaggcgccggcgaagtagatcccgagagaggtctcgcagatccagaagt
agaagtagagataggaaagagaagaagagtaccaaacgtgataagagtccatcaaggaac
cgtaaacactcaaggtctcgatcaccccgagagaaaattctgaagaaggaagatgtcaag
aaggaaattagtaaacctgaggaagaagcctttgacccttccaacctagacaaagaagag
gagcaaaaaagattagaacaagaaatgttaaaacgaagagacagaatagaacgctggaga
gcagagcgcaaaaagaaagaaatggaaggtgtacgtaaagatattaagacatcaatagcc
agcctgcagctcccatcaaaaaagtggaatctagaagatgatagcgatgaagaagaggat
aagaaggaagagaatggtggcaagaaagaggaggaagaagaaatagatcctcttgatgcc
tacatgatggatatccaagaagaggttcggaaagtgaacaaaatggatggaacaaccaaa
gcagttgatacagcccaaactaaaaattcaacaggagttgtcattgttactggagtggcc
aagaaaaaagctgatacaaacaaaggtgaattgatcgagcaaaatcaagatggattggaa
tattcatccgaggaagaacaagaagatttaacagcaacagcagcaaatcttgcaagaaca
cagaaaaaagaattggcaaaagttgaccactcgggtattaactatttgccattcagaaaa
tcattctacgttgaagttccagaaatatcccgtatgaccgatgctgaggttgaagcttac
aaagttgaactggaaggtgtccgtgtgaaaggtaaaggctgcccacgtccgattaaaact
tgggcccagtgcggagtcagcaaaaaagtcttagaaattttgaaaaagcatgaatatgag
aagccaactcctatccaggctcaagcaattccagccatcatgtctggcagagatcttatt
ggaattgccaaaacaggtagtggtaaaacacttgcatttgtccttccaatgctgcggcac
attctggaccaaccgcctctggaagacacagatgggcccattggattaatcatggctcca
actcgagagctatgcatgcaaattggcaaagatatacgtaaattttcaaagtcccttaat
ttaagagtggtttgtgtttatggtggcactggtatttcagagcaaattgctgaactgaaa
cgaggggctgaaattattgtctgcactcctggtcgaatgattgatatgttggctgctaat
agtggcaaagtaacaaatctacggcgtgtcacttacgttgtgttggatgaagcagatagg
atgtttgacatgggatttgagccacaagttatgaggatagtggataatgtaagaccagat
cgtcagcttgtcatgtttagtgcaacattcccacggcaaatggaggctcttgctcggagg
attctaaacaaacctattgaagtacaaattggtggacgaagcgttgtttgtaaagatgtt
gaacagcatgtgattgttttagatgaagatcagaagttcttaaaattgcttgaacttttg
ggaaattatttagatcaaggaagtgccatagtttttgtggacaagcaagaaaatgctgat
accttgctgaaagatttgatgaaggcttcgtatccgtgcatggcactgcatggtggtatt
gaccagtatgacagagatagcaacattgtggattttaagaccgggaaagtgaagttgcta
atagccacatctgttgctgctagaggtctagatgttaagtccttgatattggttgtcaac
tatgactgtcctaaccactatgaagattatgtccatcgctgtgggaggactggcagagct
ggaaacaaaggttatgcctacactttcctaactccggatcaagaacagcatgctggcgat
atcataagagcttttgagctttcaggactccccgtgccgccccagttgatcaagatgtgg
gactgctatcgagccaagcaagctgccgaagggaaaaaagtgcactcaggtggtggcttc
agtggcaaaggatttaaatttgatgaaacagaagcagcaattgctaatgagaaaaagaag
ttccaaaaggctgcattaggcttgcaagattctgatgatgaagacattgaaggagacatt
gatcaacagatagagcaaatccttgcgtcaaaacgaacggtcaaagaaattaaagcacca
attgcatctataaacccagagactcagcagattattcaaaacaaccagcccatgacggaa
cgtttagagcttgcaaagaagttggcttcaaagatccatatagctaaaaatctaggagcc
gaggccaaaggtgccacacaacaagcggcagaggctattctcaaaggaggaggttctcag
ccgataattatggcaagaaccgtagcggaacagctcgctgctaaactcaatacaaagttg
aattaccagccaaaagaggaagaagaggtcaaagaagaagaagtagagcaagtagaaaca
ttttgcaagtatgaggaggagctcgaaatcaatgatttccctcagcaggctaggtggcgg
gtcacatcgaaagaagccttggcgcagatctctgaatactcagaagctggtatcactgtt
cgtggcacatactttccacaagggagaaatccaccagaaggagagaggaaactatttttg
gctattgaaagtacaaatgagcttgctgtgtccaaagcaaagattgaaatcacgcgtcta
atcaaggaggaacttctaaaactccagagctcagcgcaccacatgataaacaaagctcgc
tacaaggttttgtaa
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