Budorcas taxicolor (takin): 128053964
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Entry
128053964 CDS
T08909
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax04659
Th17 cell differentiation
btax04710
Circadian rhythm
btax05017
Spinocerebellar ataxia
btax05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
128053964 (RORA)
09159 Environmental adaptation
04710 Circadian rhythm
128053964 (RORA)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
128053964 (RORA)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
128053964 (RORA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
btax03000
]
128053964 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
btax03310
]
128053964 (RORA)
Transcription factors [BR:
btax03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128053964 (RORA)
Nuclear receptors [BR:
btax03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128053964 (RORA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128053964
NCBI-ProteinID:
XP_052502440
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Position
10:47249290..48055832
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AA seq
552 aa
AA seq
DB search
MESAPAAPDPAASEPGSSGSDAAAGSRETPLNQECARKSEPPAPVRRQSYSSTSRGLSMP
VSSEGTQRRRHDPGISVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
SNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQK
HRMQQQQRDHQQQPGEAEPLTPTYSISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFY
LDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISK
SHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRID
GFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISF
VFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHR
EDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQID
GEQNIYKDRATL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctccggcagcccccgaccccgccgccagcgagccgggcagcagcggctcg
gacgcggccgccggctccagggagaccccgctgaaccaggaatgcgcccgcaagagcgag
ccgcccgccccggtgcgcagacagagctattccagcaccagcagagggttatccatgcca
gtgtccagtgagggaactcagagaaggcggcatgatccaggtatctcagtaacaaagaag
acccatacatctcaaattgaaattattccatgcaagatctgtggagacaaatcatcagga
atccattacggtgtcattacatgtgaaggctgcaagggctttttcaggagaagtcagcaa
agcaatgccacctactcctgtcctcgtcaaaagaactgtttgattgatcgaaccagtaga
aaccgctgccagcactgtcgattacagaaatgccttgccgtggggatgtctcgagatgct
gtaaaatttggccgcatgtcgaaaaagcagagagacagcttgtacgcagaagtacagaag
caccgaatgcagcagcagcagcgagaccaccaacagcagcctggagaagccgagccgctg
actcccacctacagcatctcggccaacgggctcacagagcttcacgatgacctcagcaac
tacatcgacgggcacacccccgagggcagcaaggcagactctgccgtcagcagcttctac
ctggacatccagccttccccggaccagtcaggtctcgatatcaatggaatcaaaccagaa
cccatatgtgactacacaccagcatcaggcttcttcccctattgctctttcaccaatgga
gagacttccccaactgtgtccatggcagaactagaacaccttgcacagaatatatctaaa
tcacatctggaaacttgccaatacttgagagaagagctccagcagataacgtggcagact
tttctgcaggaggagattgagaattatcaaaacaagcagcgggaggtgatgtggcaattg
tgtgccatcaaaattacagaagctatacagtacgtggtggagtttgccaaacgcattgat
ggatttatggaactatgtcagaacgatcaaattgtgcttctcaaagcaggttctctagag
gtggtatttatcagaatgtgccgtgcctttgactctcagaacaataccgtgtacttcgat
gggaaatatgctagccccgatgtcttcaaatccttaggttgtgaagactttattagcttt
gtatttgaatttggaaagagtttatgttctatgcacctgactgaagatgaaattgcatta
ttttctgcatttgtcctgatgtcagcagatcgctcatggctgcaggaaaaggtaaaaatt
gaaaagctgcaacagaaaattcagctagctcttcaacatgtcctacagaagaatcaccga
gaagatggaatactaacaaagttaatatgcaaggtgtctacattaagagccttatgtgga
cggcatacagaaaagctaatggcgtttaaagcaatatacccagacattgtgcgacttcat
tttcctccattatacaaggagttgttcacttcagaatttgagccagccatgcagattgat
ggggaacaaaacatatacaaggatcgagctaccctttga
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