Burkholderia thailandensis MSMB121: BTI_5290
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Entry
BTI_5290 CDS
T02644
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
btd
Burkholderia thailandensis MSMB121
Pathway
btd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
btd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BTI_5290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btd03021
]
BTI_5290
Transcription machinery [BR:
btd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BTI_5290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_11
TetR_N
HTH_10
HTH_28
DUF6362
HTH_17
FaeA
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
AGK51430
LinkDB
All DBs
Position
2:2066797..2067324
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AA seq
175 aa
AA seq
DB search
MSAAQLALHLDVQALYRDHHGWLQGWLRRRLGNAFDAADLAQDAFLRLILKPAPKGFDSD
AEARAYLRAMAQGMCIDLFRRRQVEQAWLDALAAQPEPCEPSPEYRAIVIETLMEVGALI
SRLSDKARNAFVMAQIHGLSTREIAAELGVSDRMVQKYLAQAMLQLALLDAGIKH
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgctcaacttgccctccacctggatgtgcaggctctttatcgcgaccaccac
ggctggttgcagggatggttgcgcaggcggctgggtaacgctttcgatgctgcggacctt
gcccaggacgcgtttctccgcctgatcctcaagccggcgcccaaggggttcgacagcgac
gccgaggcacgcgcctacttgcgtgcgatggcacagggcatgtgcatcgacctgttccgc
cgccgtcaggtcgagcaggcgtggctcgacgcgcttgccgcccagccggaaccttgcgag
ccctcgcccgaatatcgcgcgatcgtcatcgagacgctgatggaagtcggcgcgctcatc
agccggctgtcggataaagcgaggaacgcattcgtcatggcgcagatccacggcctctcc
actcgcgagattgctgccgagctcggcgtttccgaccgaatggtgcagaagtatctcgcc
caggcgatgttgcagctcgcgttgctcgacgccggcatcaagcactga
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