Bombus terrestris (buff-tailed bumblebee): 100644250
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Entry
100644250 CDS
T04364
Name
(RefSeq) DNA ligase 4 isoform X2
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100644250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bter03400
]
100644250
Enzymes [BR:
bter01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
100644250
DNA repair and recombination proteins [BR:
bter03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
100644250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT
RNA_ligase
DNA_ligase_IV
BRCT_2
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
100644250
NCBI-ProteinID:
XP_003395423
UniProt:
A0A9B0C9L8
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Position
LG B05:8519652..8527313
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AA seq
897 aa
AA seq
DB search
MNGTLASKIEFVELCDIFEKIFDTKKSQISRKADILEQFFEKCRNMGRELKTEYPDMDVS
LFPILRLILPDLEREREAYNLKEKSLANLYIRIFCFGKNSKDAIKLKQYKTPTAKNIIRR
DFADRAYSVLKNRFQYEGPHITIEQINFILDNLSLKRNETFKDLLRKSNALEFKWITRII
LKSLNLGIGTKKILQVFHPDANSLFNVSSNLRQICDTLYDPQLRYHHDIQVFSHFKPMLL
EECQIENVKKLFNGGKEYFVQCKYDGERSQIHMKDGKYKYFTRQGYDITNKPGFGETTSA
GFMSGVFGRLLNPQVKSVILDGELMGWHKERKLLGSKGMNYDVKKLSKDSPYQQCFVAFD
IIMHNDILLNNEPYEKRLEILKDVFKEEEGCLLLCKSTRVSKSEKLCEIFNESIRNKEEG
IVVKKCDSKYKPNVRNGTDCYKIKAEYSGDLVHDIDLIILGGYYNKKFMGLVNSFLMGVA
SSTKTPGENPTKFLSVVSVSSGLSMNTLKELGKMFKDKWQTERPENVIPPKVEPNVWIRP
EDSIILTIKASEMICSNNYPTGYSLRFPRVTSVREDKPWYDVCTTDNLKLLIKDTQPIQK
LTKREISYEDIEEAHESKVQEESKTKKQRLIKYEEKSMKPNIYDNPPVYLTRLFDDKEIC
VINGVDELPKEQIEEILVQHRANVVQNPLKENYCTIVGNVKTVRASCIIQSKKYDVVTLD
WFRRVTKKENWSSLQDFLPWDLICSRESTKQRLAQYYDDYYDHYTIDADEESLLRSFKKV
EDTEQNVKFDYTEMKKIDQELFDSEVSPYSLFRGIVGYFYDPSDLSKFEFRFMGGTIRET
IDDSVTNIFINNNSTGTELQNLIENKSQASLTIIKSEWIGECFKQNTIIPYSVYLVQ
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaacattagctagtaaaattgaatttgtggaattgtgcgatatattcgagaaa
atctttgatactaagaaatcacaaatatctaggaaagctgatattttggagcagttcttt
gagaaatgtcgtaatatgggtcgtgaattaaaaactgagtatccagatatggatgtttca
ctctttcctatattaagattaatcttaccagatcttgaacgagaacgtgaggcatataat
ttaaaagaaaagtctcttgccaatctttatattcgtatattttgtttcgggaaaaacagt
aaggatgcaattaaacttaaacagtacaaaactccaactgcaaaaaatattatacgtcgc
gattttgcggatagagcttattcggttttgaaaaatcgttttcaatatgaaggtcctcat
atcacaatagaacaaatcaattttattctcgataatttatcgttaaaaagaaatgaaacg
ttcaaagatttattaaggaaatcaaacgcattagaatttaaatggataacacgaattatt
ctaaaaagtttgaatcttggtattggaacgaaaaagatattgcaagtttttcatccagat
gcaaattcattgtttaatgtatcatctaatttgcgacaaatttgtgacacattatatgat
cctcaattgagatatcatcatgatattcaagttttttctcattttaagcctatgttatta
gaagaatgtcaaattgagaatgtaaagaaactttttaatggaggaaaagaatactttgtg
caatgcaaatatgatggcgagcgatctcaaatacatatgaaagatggcaaatataagtat
tttacaagacaaggatatgatattacaaataagcctggttttggggaaactacttctgca
ggttttatgagcggtgtatttggtcgattattaaatcctcaagtaaaatcagtcatttta
gatggtgaattaatgggttggcataaagaaaggaaattgttaggctcaaagggaatgaac
tatgatgttaagaaactctcaaaagatagtccttatcaacaatgttttgttgcatttgat
atcattatgcataatgatattttacttaataacgaaccttatgaaaaaagacttgaaatt
ttaaaagatgtatttaaagaggaagaaggttgccttttattatgtaaatctactagagtt
tctaaaagcgagaaattatgtgaaatattcaatgaaagtattaggaataaagaagaagga
attgtagtaaaaaaatgtgatagtaaatataaaccaaatgtacgaaatggtactgattgt
tataaaataaaagctgagtattctggagatttggtacacgatatagatttaattattctc
ggtggttattacaataaaaaatttatgggtttagtaaatagctttttaatgggcgtagct
tcttctacaaaaactcctggtgaaaatcctacaaaatttttatctgtagtatcagtcagc
agtggtctttctatgaatacattgaaagaactcggaaaaatgtttaaagataagtggcaa
acagaacgacctgaaaatgttatacctcccaaggttgagccaaatgtgtggattcgtcct
gaggattccatcattttgaccataaaagcatcggaaatgatatgtagtaataattatcca
accggatacagtttacgatttcctagagttacaagtgttagagaggataaaccgtggtat
gacgtttgtacaactgataacttgaaattattaattaaggatacgcaaccaattcagaaa
ttaacaaaacgagaaatatcttatgaagatatagaagaagcacatgaaagtaaagtacaa
gaagaaagtaagacaaagaaacaacgtttaataaaatatgaagagaaatcaatgaaacca
aacatttatgacaatccaccggtttatcttacccgactttttgatgataaagaaatttgc
gtgataaatggcgtcgatgagttacctaaagaacagattgaagaaattcttgtgcaacac
agagcaaatgttgtacaaaaccctttaaaagaaaattactgtactattgttggtaacgtt
aaaacggtaagagcaagttgcatcatacaaagtaaaaagtatgatgtggtaacattggat
tggtttagacgggttaccaaaaaagaaaattggtcgtcattacaagactttttaccatgg
gatttgatatgtagtcgtgaatcaacgaaacaacgattagcacaatattatgatgattat
tatgatcactatactatagatgctgacgaagagagtttattacgttcgttcaaaaaagtc
gaagatacggagcaaaatgttaaatttgattatacagaaatgaaaaaaatagatcaagaa
ttatttgatagtgaagtgtcaccttattctctatttcgtggtatcgtgggatatttttat
gacccatcagatttatcaaaatttgaatttcgttttatgggtggtactattagagaaact
attgacgattctgtgacaaatatttttatcaataataattccaccggtactgaactgcaa
aatttaattgagaataaatcccaggcatcgttaacaattattaaaagcgaatggatcgga
gagtgctttaaacaaaatacaattattccttattctgtatacctggtccaataa
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