KEGG   Bombus terrestris (buff-tailed bumblebee): 100644633
Entry
100644633         CDS       T04364                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bter  Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03030  DNA replication
bter03410  Base excision repair
bter03420  Nucleotide excision repair
bter03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bter00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100644633
   03410 Base excision repair
    100644633
   03420 Nucleotide excision repair
    100644633
   03430 Mismatch repair
    100644633
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bter03032]
    100644633
   03400 DNA repair and recombination proteins [BR:bter03400]
    100644633
Enzymes [BR:bter01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100644633
    6.5.1.6  DNA ligase (ATP or NAD+)
     100644633
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     100644633
DNA replication proteins [BR:bter03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    100644633
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     100644633
DNA repair and recombination proteins [BR:bter03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     100644633
   NER (nucleotide excision repair)
    Other NER factors
     100644633
   MMR (mismatch excision repair)
    Other MMR factors
     100644633
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 100644633
NCBI-ProteinID: XP_020724126
LinkDB
Position
LG B03:3887804..3892922
AA seq 975 aa
MYTRITFNLRSIVFNNIYSRPVIFLSKQFQLNAFFPIVNNVLNRILANSKIVKNGDQSNS
GNPKRKRDDSGDSSETASSPIGNSSRKKSVSKSPSLLKKVNGTPKIKLSPTVTTMEKEKR
KSKTPLTATKKKRKVNEVKSTPKKSDAKKKLKDLSSDKDQKENELTVEKKTETSDGFESS
KSSPKESKTKKNVKNIEKKATKKRSRIIAPVDSSDEEEHNLLPESPKKANLDVEENNPIN
EEENSNEDVLDIQKDSEEEEKKKEDNIEKPTKKIHNFLVFNLSICYXINKXLSXQTLYLS
APKEKESTNNTDKDKKKSSSHSYKPSASKYDPINDAFWKRGEKVPYIALTRTLELIEDTS
ARLKIIEILSNYFRSVIVLSPDDLLPSIYLCLNQLAPAYEGIELGVAETNLMKAIAQCTG
RTLAQIKADVQTVGDLGIVAEGSRSNQRTMFQPAPLTVSNVYTRLKEIAQMTGSASLTKK
LDKIQSLFVACRFTEARYLIRSLAGKLRIGLAEQSVLQALALACTMTPPIQSYPPEVLDV
SKKMSSDAFKQKYDETALTLKTTYCECPNYDKIIPVLLKEGIEELSNKCKITPGIPMKPM
LAHPTKGVQEVLTRFDGLKFTCEWKYDGERAQIHLAEDGKINIYSRNQENNTSKYPDIIG
RLKNTQGEEVKSCILDCEAVAWDNENKQILPFQILSTRKRKDANEADIKVQVCVFMFDLL
YLNGEPLVQQPFIKRRELLKKNFKEVIGEWKFATSLDTSTMEQVQDFLDESVKGNCEGLM
VKTLEQDATYEIAKRSRNWLKLKKDYLEGVGDTLDVVVIGGYIGKGKRTGTYGGFLLACY
DQENEEYQSVCKIGTGFSEEDLQKHTEFFKEHIIPQTKSYYRYDSSLEPDHWFEPVQVWE
IKCADLSLSPVHKAAVGIIDPEKGISLRFPRFVRIRDDKNNEDATSAQQIADMYNSQEQI
KNQTSSTKVAEEDFY
NT seq 2928 nt   +upstreamnt  +downstreamnt
atgtatactcgtattacgttcaatttgagatcaattgtattcaataatatttattcgcga
cctgtgatatttttaagtaaacaattccaattgaatgcttttttccctattgtaaataat
gttcttaatcggatactcgctaatagcaaaattgtaaagaatggagaccaaagcaattcg
ggaaaccctaaacgaaaaagagacgatagtggagatagcagtgaaactgccagttcacct
attggaaattcctcaaggaagaaatcagtctcaaaatctccttcactactgaagaaagta
aatggaacaccaaaaattaagctatcaccaacagtaacaactatggaaaaagaaaaaaga
aaaagcaaaactccacttactgctactaaaaagaaaagaaaagtcaatgaagtaaaaagt
acccctaagaagagcgatgcaaagaagaaattgaaagatctgtcaagtgataaggaccag
aaagaaaatgagttaactgtagagaaaaaaacagaaacaagtgatggatttgaatcttca
aagtcttcgcctaaggaatctaaaactaaaaagaatgttaaaaatattgaaaagaaagct
actaaaaaaaggtcaaggataatagcacctgtcgattccagtgacgaagaagaacataat
ctattgccagagagtcccaaaaaagcaaatcttgatgtagaggaaaataacccaattaat
gaagaagaaaattctaatgaggatgttctagatattcaaaaggacagcgaagaagaagaa
aagaaaaaagaagacaatatagagaagcctacgaagaagatacataattttttggtattt
aatttatcaatatgttactaaataaataaataactatcttaacaaactttatatctttca
gctccaaaagagaaagaaagtacaaacaatactgataaagataagaaaaagtcttccagt
cactcttataaacctagtgcctcgaaatatgacccaataaatgatgcattttggaaacgg
ggagaaaaggtaccatatattgcgttgacacgtaccttggaattgatcgaagatacaagc
gctcgattaaaaataatagaaattttatcaaattatttccgatctgtaatagttttaagc
ccagatgacttacttccaagtatatatttatgtctcaatcaattagcacctgcttatgaa
gggattgaattaggggtggcagaaacaaatttgatgaaagctatagcacaatgtactggt
agaacattagctcaaattaaagcagacgtccaaacagttggggatttgggcatcgtagca
gaaggaagtcgttccaatcaaagaactatgtttcaacctgctccactgacagtatcgaat
gtatatactaggctgaaagagatcgcacaaatgactggttctgcgtctttaaccaaaaaa
ttggataaaattcaatcgctttttgtagcgtgtcgttttactgaagccagatatctgatt
cggtccctagccggcaaacttcgaattggtctagcagaacaatctgtgttacaagctttg
gcactagcatgtactatgacaccaccaatacaaagttatccaccggaagttttagacgtg
agtaagaaaatgtcaagcgatgcctttaaacaaaagtacgacgaaactgcgcttactctt
aaaacaacatattgtgaatgtccaaattatgacaaaataatccctgttttattaaaagag
gggattgaagaattatcaaacaaatgtaaaattacacctggcatacctatgaagccaatg
ttggcacatcctactaaaggtgtgcaagaagtattaacgcgtttcgatgggttgaaattt
acttgtgaatggaagtacgatggagaaagagcgcagattcatttagccgaggatggtaaa
attaatatttacagtagaaatcaagaaaataataccagcaaatatcctgatattatagga
agattaaaaaatactcaaggtgaagaagttaaaagttgtatccttgactgtgaagcagta
gcttgggataacgagaataaacaaatcctacctttccaaatactcagtacaagaaaacgc
aaggatgcgaacgaagcagacattaaagttcaagtatgtgtgttcatgtttgatttattg
tatttaaatggagaaccactggtacaacaacctttcataaaacgtcgtgaattattgaaa
aagaatttcaaagaagtaattggagaatggaaatttgcaactagtttagatacttcgact
atggaacaagtgcaagatttcttagatgaatcagtcaaaggcaattgcgagggtcttatg
gtgaagaccttagaacaggatgcaacatatgagattgctaaacgttctcggaattggtta
aaattgaagaaagattatttagaaggtgtaggtgatacattagacgtggttgtcattggt
ggctatataggcaaaggaaaaaggacaggaacctatggaggatttcttttagcttgttat
gatcaagagaatgaggaatatcaaagtgtttgtaaaattggtactggatttagtgaagaa
gaccttcaaaagcacacagaattcttcaaagaacatataataccacaaactaagtcctac
tatcgttatgactcgtctctcgaacctgatcactggttcgagccagttcaagtgtgggaa
attaaatgtgcagatctttctttgtcacctgttcataaggcagccgttggtattattgat
ccagagaaaggaatatctttgcgatttccacgttttgtccgcattcgcgatgataaaaac
aatgaggatgctacatcagcgcaacaaattgcagatatgtacaatagtcaagagcagata
aaaaatcaaacatcatcaacaaaagtagctgaagaagacttttattga

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