Bombus terrestris (buff-tailed bumblebee): 100648701
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Entry
100648701 CDS
T04364
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03022
Basal transcription factors
bter03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100648701
09124 Replication and repair
03420 Nucleotide excision repair
100648701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bter03021
]
100648701
03400 DNA repair and recombination proteins [BR:
bter03400
]
100648701
Transcription machinery [BR:
bter03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100648701
DNA repair and recombination proteins [BR:
bter03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100648701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
100648701
NCBI-ProteinID:
XP_003393621
UniProt:
A0A9B0BUQ2
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Position
LG B02:complement(3168408..3170713)
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AA seq
467 aa
AA seq
DB search
MSNTISGKNLLRPAGLQCKNLQEYLKSRPPEVLNKLYHNPPICLAVFRELPVIAKHYVMR
LLFVEQPVPQAVIASWCSKLHFEEHQKVVLILNELNVWKEASIPGGLPGWILNTTFKKNL
KIVLLGGGKPWTMSNQLETDSKPRDVAFLDSYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDEADGSPVITQAGFQFLLLETASQVWYFILQYLDTIEARGLDLVECLTFLF
QLNFSTLGKDYSTEGMSEGLSTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGQNKPL
SRDPEKEGYIVVETNYRVYAYTNSNLQVALLGLFCEMLYRFPNLVVSILTRDSVRQALKS
GITAAQIVGYLQQHAHGKMIEAGPPVLPPTIVDQIKLWENERNRFIFNEGVLYSQFLSQT
DFEVLRDHALSTGVLIWQNERKRTIVVTKAGHDDVKKFWKRYSKGSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatacaataagtggaaaaaacttgttacgaccagctggattgcaatgtaaaaat
cttcaagaatatttaaaatcacgtccaccagaagtattaaacaaattatatcataatcct
ccaatttgcttggctgtgtttcgggaattgccggtaatagcaaaacattatgttatgcga
ttattatttgttgaacaacctgtacctcaagcggttattgcctcctggtgttctaaactt
cattttgaggaacatcaaaaagtagttttgatactaaatgaactaaatgtatggaaagaa
gcatcaataccaggtggactacctggatggattttaaatactacattcaagaaaaactta
aaaatcgttcttttgggaggtggaaaaccatggacaatgtcaaaccaattagaaactgat
agtaaacctagagatgttgcatttttagattcatatgcattagaaaggtgggaatgtgtt
ttacattacatggttggttcacaacagcaagaaggtatatctgctgatgctgttagaatt
cttttacatgctggcttgatgaagcgtgatgaagctgatggaagcccagttattacacaa
gcaggttttcaatttttgttattggaaactgcatcgcaggtgtggtattttattttacaa
tacctagatacaatagaagcaagaggacttgacctagttgaatgtcttacttttttattt
caattaaatttctcgacacttggtaaagattacagtactgaaggaatgtccgaaggtctg
tcaacatttttacaacatttaagagaatttggtttggtttatcaaagaaaacgaaaagct
ggaagattttatcccacaagattagcattaaatattgcaactggacaaaataaaccattg
tctagagatccagagaaggagggttacattgttgttgaaacaaattacagagtatatgct
tatacaaactcgaatttacaagtagctttacttggactattttgtgagatgttatatagg
tttccaaacctggttgtgtcaatattaacaagagattctgtacgtcaagctctgaaaagt
ggaattactgctgcccaaattgtaggttatttgcagcaacatgctcatggtaaaatgata
gaagcaggtcctccagttttaccaccaactatagtagatcaaattaaattatgggaaaat
gaaagaaatagattcatatttaatgaaggagttttatatagtcaatttctttctcaaact
gattttgaagtccttagagatcatgctctttctactggagtactaatttggcaaaacgaa
aggaaacggactatagtagttacgaaagcaggtcatgacgatgtaaaaaaattttggaaa
cgatattccaaaggctccagttag
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