Bacteroides thetaiotaomicron VPI-5482: BT_0966
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Entry
BT_0966 CDS
T00122
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Pathway
bth02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BT_0966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bth03021
]
BT_0966
Transcription machinery [BR:
bth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BT_0966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
HTH_38
HTH_35
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AAO76073
UniProt:
Q8A951
LinkDB
All DBs
Position
complement(1183169..1183720)
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AA seq
183 aa
AA seq
DB search
MSNNIDIKTLEAFQDGNHKAFETVFIAYYNKTKAFIDGYIKSESDAEELTEDLFVNLWIN
HDSIDASKSFSSYLHTIARNSAINFLKHKYVHDTYLNSSQEIEYSSTSEEDLIAKELGLL
IDDIVGKMSEQRKMIYTLSRQEGLSNAEIAIQLNTTKRNVESQLSLALKEIRKAISCFLL
SFL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataacattgacataaaaacgcttgaagccttccaggatggaaatcacaaggct
tttgaaacagtttttatagcctattacaataaaacaaaggctttcatcgacggatatata
aaatcggaatcggatgccgaagaattgacagaagacctttttgtcaacctttggatcaat
catgattcaattgatgcatccaagtcttttagttcttatctgcatacaattgcccgtaat
tcggccataaatttcttgaaacataagtatgtacatgacacttatctaaatagtagtcag
gagatcgaatatagttctacctccgaagaagatcttattgctaaagagttaggcttatta
atagatgacattgtcggaaaaatgtcggaacagcggaaaatgatctatacattaagccgt
caggaagggttgagcaatgctgagatagcaatacagctcaacaccactaaaagaaatgtc
gaaagtcagttaagcctcgcattaaaggagatacggaaagctatctcgtgctttttatta
tcttttttataa
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integrated database retrieval system
