Bacteroides thetaiotaomicron VPI-5482: BT_2198
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Entry
BT_2198 CDS
T00122
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Pathway
bth02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BT_2198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bth03021
]
BT_2198
Transcription machinery [BR:
bth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BT_2198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
HTH_23
HTH_10
HTH_40
HTH_24
HTH_38
HTH_28
RE_Bsp6I
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AAO77305
UniProt:
Q8A5P0
LinkDB
All DBs
Position
complement(2762259..2762840)
Genome browser
AA seq
193 aa
AA seq
DB search
MIHSLPSSEPLTAQKLFSKLYVSYYARLVRFASLYVGAMGDAENIVQDFFLYLWERKEIL
PELQQPDAYLFSAVKHRCLNFLRSQLSIVDRRQPLSDIMEQEFKLKLYSLQLLDDSQMSI
DEVEKQICRAIDSLPERCREIFVMSKLKGMKYREIAESLGISQNTVEGQMAIALRKLREE
LRHCMPLLLLLSV
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgatacattctcttccatcttccgaacccttgacggcacaaaagcttttctcaaagctt
tatgtttcctactatgcccgtttggttcgtttcgcttccctttatgtaggagctatggga
gacgcagagaatatagtacaagattttttcctctatttatgggaacgtaaagagatactt
ccggaactgcaacagcccgatgcatatcttttctccgctgtcaagcatcgctgtctgaac
ttccttcgttcacaactttctatagtagaccgcaggcagccgctttctgatattatggag
caggagtttaaactgaaactttatagtctgcaactacttgatgactctcaaatgtcgata
gatgaagtagaaaaacagatctgccgtgcaattgatagcttaccggaacgttgccgggaa
atatttgtcatgagtaagctgaagggtatgaaatatcgtgaaatagccgaatcccttggc
atttcgcagaatacggtagaaggtcaaatggctatcgctttgaggaaacttcgggaagaa
ttgcgtcattgtatgcctttgctgcttctattgagcgtataa
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