Bacillus thuringiensis serovar kurstaki YBT-1520: YBT1520_15615
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Entry
YBT1520_15615 CDS
T03435
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bthr
Bacillus thuringiensis serovar kurstaki YBT-1520
Pathway
bthr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YBT1520_15615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthr03019
]
YBT1520_15615
03400 DNA repair and recombination proteins [BR:
bthr03400
]
YBT1520_15615
Enzymes [BR:
bthr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YBT1520_15615
Messenger RNA biogenesis [BR:
bthr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
YBT1520_15615
DNA repair and recombination proteins [BR:
bthr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
YBT1520_15615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_7
A-ATP_synth_H_N
GerE
HTH_45
HEM4
HTH_10
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AHZ51779
LinkDB
All DBs
Position
3013682..3015799
Genome browser
AA seq
705 aa
AA seq
DB search
MFTKAQELLASYFGYSSFRRGQDETIKNVLDGKDTVCIMPTGGGKSICYQIPALVFEGTT
LVISPLISLMKDQVDTLVQNGISATYINSSISIAEANQRIQLAKQGHYKLLYVAPERLDS
MEFVDQLIDMKIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQ
VRDDICNTLEINQENTIMTTFERENLSFSVIKGQDRNAYLADYIRQNQKESGIIYAATRK
VVDQLYEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRY
VIHYQLPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK
LQNMTDYCHTEQCLQSFILQYFGEEPKEDCGRCGNCTDNRESIDVTRESQMVLSCMIRTN
QRFGKQMIAQVLTGSKNKKVIEFNFHTLPTYGLLSNRSVKEVSEFIEFLISDELIAVEHG
TYPTLKVTEKGKEVLLGKENVLRKERVETRQIVQDHPLFEVLREVRKEIAQGEGVPPFVI
FSDQTLKDMCVKMPQNDSELLTVKGIGEHKLVKYGSHFLQAVQHFIEENPNYAETIKTEV
VSERKKSGKASANSHLETYEMYKQGIDLNEIAKERNLSRQTIENHLIRCYEDGMEVDWQS
FVPAEYESLIETAVQNAEGGLKSIKEQLPNEVSYFMIRAYLQIRK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactaaagcacaagaacttttagcgtcctactttggttattcttcgtttcgaaga
ggacaagatgaaacaattaaaaatgtactagatgggaaagatacggtttgtattatgcca
acgggtggcggtaagtcgatttgttatcaaattccggcattagtatttgaaggaacgacg
ttggttatatcgcctctaatatcacttatgaaggatcaagtagatacattggtacagaat
ggcatttcagctacatatattaatagttctatatctattgcagaagcaaatcagcgaatt
caattagcgaaacaaggacattacaagttactttatgtggcgcctgagcgtcttgattcg
atggagtttgttgatcaacttattgatatgaaaatccctatgattgcgattgatgaagca
cactgtatttcacagtggggacatgatttccgtccaagttatttacatatacatcgcata
ttagattatcttccagaaaagccgctcgtattagcattaacagcaacagcaacaccgcaa
gtacgtgatgatatttgtaacacacttgaaattaatcaagaaaatacaattatgacaacg
tttgagcgtgagaacttatcgttttctgtcattaaagggcaagatcgaaatgcatatttg
gcggattatattcgtcaaaatcaaaaggaatccgggattatatatgcagctactagaaaa
gtagtcgatcagttatatgaagatttgatgaaggcaggtgtttctgtatcaaaatatcat
gctggtatgagtgatagtgatcgaaatgagcaacaagaactctttttacgagatgaagta
agtgtaatggtagcaacatctgcattcgggatgggtattgataaatcgaatattcgttac
gtaattcattatcagcttccaaaaaatatggaaagttactatcaagaagcaggacgtgct
ggtcgtgacggattagatagtacatgtatattgttatattcttctcaagatgtacaagta
cagcgttttttaattgatcaatcaactggagaatcacgtttttcaaatgaacttgaaaaa
ttgcaaaatatgaccgattactgtcatacagaacaatgtttacaatcattcattttgcaa
tactttggagaagaaccgaaagaagattgtggacgctgtggtaattgtacagacaatcgc
gagagcatcgatgtgacaagagaatcacaaatggttttatcatgcatgattagaacgaac
caacgctttggaaagcaaatgatagcgcaagtattaactgggtcgaagaataagaaagtt
attgaatttaattttcatactttaccaacgtatgggcttttatcgaaccgtagtgtaaaa
gaggtcagtgagtttattgagtttttaatttcagacgagttaattgcagttgaacatggc
acttatccgacgttaaaagtaactgaaaaagggaaagaagtattacttggtaaagagaat
gttttacgaaaagaacgagtagagacaagacaaattgttcaagaccatcctttatttgaa
gtgcttcgtgaagtacgtaaagaaattgcacaaggagaaggtgtacctccgttcgttatt
ttctctgaccaaacattaaaagatatgtgtgtgaaaatgccgcaaaatgattctgaattg
ttgacggtaaaaggtatcggagaacacaaacttgtgaaatatggctcgcacttcttacaa
gcagttcagcattttattgaggaaaatccaaattatgctgaaacgattaagacagaagta
gtttcagagcgtaaaaagtcaggaaaagcatccgcaaattctcatttagaaacatatgaa
atgtataaacaaggtattgatttgaatgagattgcaaaagaacgtaacttatcaagacaa
acaattgaaaaccatttaattcgctgctatgaggatggaatggaagtagattggcaaagc
tttgttccagcagagtatgaatctcttattgaaactgccgttcaaaatgcagagggtggg
ctgaaatctattaaagaacagcttccgaatgaagtgagttactttatgattcgtgcttat
ttacaaataagaaagtag
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