Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_22580
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Entry
F544_22580 CDS
T03019
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Pathway
btra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F544_22580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btra03021
]
F544_22580
03400 DNA repair and recombination proteins [BR:
btra03400
]
F544_22580
Enzymes [BR:
btra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F544_22580
Transcription machinery [BR:
btra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F544_22580
DNA repair and recombination proteins [BR:
btra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F544_22580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AHG87486
UniProt:
W0R9L4
LinkDB
All DBs
Position
complement(2387334..2391611)
Genome browser
AA seq
1425 aa
AA seq
DB search
MKDLVKFLKAQSKSSDDFDVIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRDRMGHIELACPVAHIWFLKS
LPSRIGLILDMPLRDIERVLYFESYVVIEPGMTDLEKNQLLTEEQYWEAEERWGDEFEAK
MGAEGIQALLKDLDLEHQCEVLREELQETNSETKRKKITKRLKLLEAFMQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLVAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
YLRLHQCGLPKKMALELFRPFIYSKLESRGIASTIKAAKKMVEREDPIVWDILAEVIREH
PILLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNVLSPANGDPIIVPSQDVVLGLYYMTRDKVNGKGEGMYFLDPREAEKAYRT
GQAELHARVKVRITEYEKNEAGEFEAKTSLVETTIGRAILWMIAPKGMPYSLFNQTLGKK
AISKLINESYRRLGLKESVVFADQIMYTGFAYAARSGSSVGIDDMVIPEQKYSIIEAAEA
EVAEIQEQFNAGLVTAGERYNKVIDIWAAANERVAKAMMENLSTEEVINREGNPEKQASF
NSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVIVEDDCGTEEGIVMTPHIEGGDEKVPLRELV
LGRVVAEDVLKPGSDEVLIARNTLIDEKLCDVIDQNSVDSIKVRSVVTCNTDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSVQVKNAGTIK
LANAKFVTNKDGKIVLTSRNTELTVIDSFGRTKENYKVPYGAVLSKNDGAEVTAGEVVAN
WDPHTMPIISEVSGFIKFADIVDGLTVTRQTDELTGLSSIVVQDAGERPTAGKDLRPALK
LVDAQGNDILHNDTPVQYILPGKAIVSLNEGAEVSVGEALARIPQESTGTKDITGGLPRV
ADLFEARKPKEPAILAEISGIVSFGKETKGKRRLVITPAEGEAHEEMIPKWRQLNVFEGE
MVQRGDVISDGAETPHDILRLRGVHAVTDYIVNEVQEVYRLQGVKINDKHIEVIVRQMLR
KAIITNAYDSEFLEGEQVEVARVKIVNRKREAEGKPLVEFERELLGITKASLATESFISA
ASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHKERAKRRAAGEEFSLN
IEAAAPVSSFASAEEIEAETQSFIADDATSSLAALLNAGMDEVEE
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttagttaagtttttaaaagcacaatctaaatcaagcgatgattttgatgtg
attaaaatcggtttagcatcaccagacaagatccgttcttggtcattcggtgaagtgaaa
aaaccagaaaccatcaactaccgtacttttaaaccagagcgtgatggtctgttctgtgcg
cgtatcttcgggccggtaaaagattacgaatgtttgtgtggtaaatacaaacgtttaaaa
caccgtggtgtaatctgtgaaaaatgtggcgttgaagtaacgcaaactaaagttcgccgt
gatcgtatgggtcacatcgaattagcgtgtcctgttgcgcacatctggttcttaaaatca
ttaccgtcccgtatcggtttgattttagatatgccattgcgtgatattgagcgtgtgctt
tattttgaaagctatgtggttatcgagccgggtatgactgatctcgagaaaaaccaactt
ttaaccgaagaacaatactgggaagcggaagagcgttggggtgatgagtttgaagcaaaa
atgggtgcagaaggtatccaggcattgttgaaagacttagatttagagcatcaatgtgaa
gtattgcgtgaagagttacaagaaaccaattctgaaaccaaacgtaaaaaaatcactaaa
cgtttgaaattattagaagccttcatgcaatctggtaacaaaccagaatggatggtaatg
actgtattacctgtgcttccaccagatttacgtccattagtaccacttgatggtggtcgt
tttgcgacttcagatttgaacgatttatatcgccgtgtaatcaaccgtaacaaccgttta
aaacgtttattagacttagttgcaccagacattatcgtgcgtaacgaaaaacgtatgttg
caagaatctgttgatgcgttattagataatggtcgtcgtggtcgtgcgattacaggttca
aacaaacgtccgttaaaatctttggcagatatgatcaaaggtaaacaaggtcgtttccgt
caaaacttgctcggtaaacgtgtggactactcaggccgttcggtaatcaccgtaggtcca
tacttacgcttacaccaatgtggtttaccgaaaaaaatggcattggaattattccgtccg
tttatttactctaaattagagagccgtggcattgcatcaaccatcaaagcagcaaagaaa
atggtggaacgtgaagatccaatcgtttgggatatccttgcggaagtgattcgtgaacac
ccaattctgcttaaccgtgcaccaactcttcaccgtttgggtatccaagcgtttgaacca
ttgttaattgaaggtaaagcaattcagttacacccacttgtgtgtgcggcgtttaacgcg
gacttcgatggtgaccaaatggcggtacacgtaccattaacccttgaagcacaattagaa
gcacgagcgttaatgatgtctaccaacaacgttttatctcctgcgaacggtgatccgatt
atcgtaccatctcaggacgttgtacttggtctctactatatgacccgtgataaagtgaac
ggcaaaggtgaaggtatgtatttccttgacccacgtgaagcggaaaaagcatatcgtact
ggtcaagcggaattacatgcccgtgttaaagtgcgtatcactgaatatgagaagaatgaa
gctggtgaatttgaagcaaaaacttcattagtggaaacgactattggtcgtgctatttta
tggatgatcgcaccaaaaggtatgccatattcactgtttaaccaaactttaggtaaaaaa
gcgatctcgaaactgatcaacgaaagctatcgccgtttaggtttgaaagagtcagttgtt
tttgcagaccaaattatgtacaccggttttgcttatgcagcacgttctggttcatcggta
ggtatcgatgatatggtgattccagagcaaaaatactcaattatcgaagcagcagaagca
gaagttgcggaaattcaagaacagtttaacgcaggtcttgtaaccgcaggtgagcgttat
aacaaagtgatcgatatttgggcggctgcgaacgaacgtgtagcaaaagcgatgatggaa
aacctttcaacggaagaagtaatcaaccgtgaaggtaaccctgaaaaacaagcctcattt
aacagcatctttatgatggcagattctggtgcgcgtggttctgcggcacagattcgtcag
cttgctggtatgcgtggtttgatggcacgtccagatggttcgattatcgaaacgccaatc
accgcaaacttccgtgaaggcttaaacgtattacagtactttatttcaacccacggtgcg
cgtaaaggtcttgcggataccgcattaaaaacagcgaactctggttacttaactcgtcgt
ctagtggatgtagcacaagacttggtaatcgttgaagacgactgtggcaccgaggaaggt
atcgtcatgacaccacatattgaaggtggcgatgagaaagtaccattacgtgagcttgta
ttaggtcgtgtggttgcagaagatgtattaaaaccgggttcggacgaagttttaattgca
cgtaatacactaatcgatgaaaaattgtgtgatgtgatcgaccaaaactctgtcgatagc
atcaaagtacgctcagtggtaacctgtaacacagactttggtgtgtgtgcgaaatgttac
ggtcgtgacttagctcgtggtcacttgattaaccaaggtgaagcggttggtgttatcgca
gcacaatctatcggtgaaccgggtacacagttaaccatgcgtacgttccatatcggtggt
gcggcatctgcagcagctaaagaatctagcgttcaagtgaaaaatgcgggtacaattaaa
ttagccaatgcgaaatttgtaactaacaaagatggtaagattgtgcttacttcacgtaat
actgaattaaccgtgatcgatagctttggtcgtaccaaagagaactataaagtgccttac
ggtgcagtattaagcaaaaacgatggtgcagaagttaccgctggtgaagtggtcgcaaac
tgggacccacataccatgccgatcatctcggaagtatctggcttcatcaaatttgcagac
atcgtggacggtttaactgttactcgtcaaaccgatgaattaacaggtttatcttctatc
gtggtacaagatgcgggtgagcgtccaaccgcaggtaaagatttacgcccagcattaaaa
ttagtggatgcacaaggtaatgacattctgcacaacgacactccagtacaatatatcctt
ccgggtaaagcgattgtaagcttgaacgaaggtgcggaagtgtctgtgggtgaagcgtta
gcacgtattccacaagaaagtacaggtacgaaagatattaccggtggtcttccacgcgtt
gcagacttattcgaagctcgcaaaccgaaagagccagccatcttggcggaaatctcaggt
attgtctcatttggtaaagaaaccaaaggaaaacgccgcttggtgattactccagcagaa
ggcgaagcacatgaagagatgattccaaaatggcgtcagctcaacgtatttgaaggtgag
atggttcaacgtggtgatgtgatctctgatggtgcagagacaccacatgacatcttacgt
ttacgtggcgttcacgctgtaactgactacatcgtaaacgaagtgcaagaagtttaccgc
ttacaaggggtaaaaattaacgacaagcacatcgaagtgatcgtccgtcaaatgttgcgt
aaagcgatcatcaccaatgcttacgactctgagttcctcgaaggcgaacaagttgaagtt
gcacgagtgaagatcgttaaccgcaaacgcgaagcggaaggcaaaccgttggtagaattt
gaacgtgaactacttggtattaccaaagcatcacttgcaacagaaagctttatttctgcg
gcatcgttccaagagactactcgcgtgcttaccgaagcagcagttgcaggtaaacgtgat
gaattgcgtggcttaaaagagaacgttatcgttggtcgcttaatcccagcaggtacaggt
tttgcctaccacaaggaacgtgcaaaacgccgtgcagcgggtgaagagttcagcttgaat
atcgaagcagcggcgccagtttcttcttttgcaagtgcagaagagattgaagcagaaacc
caaagctttatcgctgatgatgcaactagcagcctagccgcattgttaaatgcaggtatg
gatgaagtagaagagtag
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