Bordetella trematum: SAMEA390648702399
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Entry
SAMEA390648702399 CDS
T04322
Symbol
cynR_10
Name
(GenBank) LysR family transcriptional regulator
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
btrm
Bordetella trematum
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
btrm03000
]
SAMEA390648702399 (cynR_10)
Transcription factors [BR:
btrm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SAMEA390648702399 (cynR_10)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_30
HTH_20
CtIP_N
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
SAI70724
UniProt:
A0A157SKA8
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All DBs
Position
1:2508921..2509829
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AA seq
302 aa
AA seq
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MEIRQLKYFLEAARLEHITQAAQSLHITQSTLSHQLRQLEAELGTPLFDRVGRQVRLTEA
GRLLVRFAQRALRDLDEGRLALQSLNSLESGELRVGVITTYTNSLLSRAIAAFATHYPGV
HLSIQDLPMAQIERGLQDGMLDLGMGFINPDAESLLESEPLFSERLMLLVREDHPLAARR
VIGRKDLPSLDIVLQSRQYISRQLIERHLARDIAGRVRIELDSLQAMQSIVANSHLACML
FEGAVIAQPGLRAIPIGSPRVIRSAALLWPRERYRSAAAREFARRVKADLPQNIRAAAAR
DG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtggaaatccgtcagctcaaatactttctggaggccgcgcgcctggagcacatcacccag
gcggcgcagtcgctgcatatcacccaatcgaccttgtcgcaccagttgcgccagctggag
gccgagctgggcacgccgctgttcgaccgggtcgggcggcaggtgcgcctgaccgaggcc
ggccgtctgctggtgcgctttgcgcagcgcgcgctgcgcgacctggatgaaggccgtctg
gcgctgcagtcgctcaacagtctggagagcggcgagcttcgggtgggggtcatcaccacg
tataccaactccttgttgtcgcgcgcgatcgcggcgttcgcgacccactatccgggcgtg
cacctgtcgatccaggatctgcccatggcgcagatcgagcgcgggctgcaggacggcatg
ctggatctggggatgggtttcatcaatcccgacgccgaatccctgcttgagagcgagccg
ctgttctccgagcggctgatgctgctggtccgtgaggaccatccgctggccgcgcgccgt
gtgatcggccgcaaggatctgccgtcgctggatatcgtgctgcagtcgcgccagtacatt
tcgcgccagctgatcgagcgccatctggcgcgcgatatcgccggcagggtgcgcatcgag
ctggattccctgcaggccatgcagagcatcgtggccaacagccatctggcctgcatgctg
ttcgagggggccgtgatcgcgcagccgggcctgcgggcgattcccatcggttcgcctcgc
gtgatccgcagcgcggcgttgctgtggccgcgcgagcgctaccgctcggcggcggcgcgt
gagttcgcccggcgggtcaaggcggacctgccgcagaacatacgggcggcggcagcccgc
gacggttga
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