Burkholderia ubonensis: BW23_5642
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Entry
BW23_5642 CDS
T03794
Name
(GenBank) carbohydrate-selective porin, OprB family protein
KO
K07267
porin
Organism
bub
Burkholderia ubonensis
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bub02000
]
BW23_5642
Transporters [BR:
bub02000
]
Other transporters
Pores ion channels [TC:
1
]
BW23_5642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
AJX13315
LinkDB
All DBs
Position
II:2694714..2696162
Genome browser
AA seq
482 aa
AA seq
DB search
MKNHYEPTPRKTRLHACATLLLSLAAAPAFAQSASPAAEPAAGDTAAPAPTGLWERSNLF
GNLGGLRDVLGDHGVTLSLQETSEYLYNTSGGTARGGAYQGLTQFGLNVDTAKAIGLPGG
TFNVSGLQIHGTNLTQRNLQTLQTATGIEANSTTRLWELWYQQAFLDGKADVKIGQQSLD
QEFMVSQYATSFMNATFGWPVLPAVDLPAGGPAYPLSSLGVRLRVKPSDAWTVLGGVFDG
NPAGRFGGDAQQLNAHGTNFNLRSGALLIGEVQYALNAPPADPKAPQPAGLPGTYKLGVW
YQSQHFDDLRTGTDGLSLANPASNGIPASHHGNYGFYAVADQMVWRQAPDSPRSLGVFAR
VMGAPGDRNVVDLALNAGVTLKAPFAGRDNDVAGLAVGYAKVGSHARALDGDTGVYTTPG
YPVRRAETVVEATYQYQVTPWWQLQADLQHFFRPSGGIPNPNAAGARIGDETVVGVRTTI
TF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccactacgagcccactccgcgcaagacccgtctccatgcgtgcgcgacgctg
ctgctgtcgcttgcggccgcgcccgcgttcgcgcaatccgcatcgcccgcagccgagccg
gccgccggcgacaccgccgcgccggcgcccaccggcctctgggagcgctcgaacctgttc
ggcaacctgggcggcctgcgcgacgtgctcggcgatcacggcgtcacgctgagcctgcag
gaaaccagcgaatacctgtacaacacgtcgggcggcacggcacgcggcggcgcataccag
ggcctcacgcagttcggcctgaacgtcgacacggccaaggcgatcgggctgccgggcggc
acgttcaacgtgtccgggctgcagatccacggcaccaacctcacgcagcgcaacctgcag
acgctgcagaccgcgaccggcatcgaagcgaactcgaccacccgcctgtgggagctgtgg
taccagcaggcgttcctcgacggcaaggccgacgtgaagatcggccagcagagcctcgac
caggaattcatggtgagccagtacgcgacgtcgttcatgaacgcgacgttcggctggccg
gtgctgccggcggtggacctgcccgcgggcggccccgcctatccgctgtcgtcgctcggc
gtgcggctgcgcgtgaagccgtccgacgcatggaccgtgctgggcggcgtgttcgacggc
aacccggccggccgtttcggcggcgatgcgcagcagctcaacgcgcacggcaccaacttc
aacctgcgcagcggcgcgctgctgatcggcgaggtgcagtacgcgctcaacgcaccgccg
gccgacccgaaggcgccgcagccggccggcctgccgggcacctacaagctcggcgtctgg
tatcagtcgcagcatttcgacgacctgcgcaccggcacggacggcctgtcgctcgcgaat
ccggcgagcaacggcatcccggcgagccaccacggcaactacgggttctatgcggtcgcg
gaccagatggtgtggcgccaggcgccggacagcccgcgctcgttgggcgtgttcgcgcgc
gtgatgggcgcgccgggcgaccgcaacgtcgtcgatctcgcgctcaacgcgggcgtcacg
ctgaaggcgccgttcgcgggccgcgacaacgacgtcgccggtctcgcggtcggctacgcg
aaggtcggctcgcacgcgcgcgcgctcgacggtgacaccggcgtgtacacgacacccggc
tatccagtgcgccgcgcggagacggtcgtcgaagcgacctaccagtaccaggtcacgccg
tggtggcaattgcaggcggacctgcagcacttcttccgtccgtcgggcggcatcccgaac
ccgaacgcggcgggcgcgcgcatcggcgacgagacggtcgtcggcgtgcgcacgacgatc
acgttctga
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