Burkholderia sp. RPE67: BRPE67_BCDS15190
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Entry
BRPE67_BCDS15190 CDS
T03604
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bue
Burkholderia sp. RPE67
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bue03032
]
BRPE67_BCDS15190
03400 DNA repair and recombination proteins [BR:
bue03400
]
BRPE67_BCDS15190
Enzymes [BR:
bue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BRPE67_BCDS15190
DNA replication proteins [BR:
bue03032
]
Prokaryotic type
DNA Topoisomerases
BRPE67_BCDS15190
DNA repair and recombination proteins [BR:
bue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BRPE67_BCDS15190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BAO89433
LinkDB
All DBs
Position
2:complement(1583151..1584476)
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AA seq
441 aa
AA seq
DB search
MTTKADQARHTVATIDKNSDAGGPQGCPEDLPPGLRYMDDARRGYTREWIDGAFAYFNTQ
GRRIDDEAEIRRINALAIPPAYTAVWICPDARGHLQATGRDARGRKQYRYHPQWRETRDA
NKYERMLAFSAVLPRLRARVARDLSLDGMPRDKVLATVVRLLDTTLIRVGSEEYARENRS
YGLTTLRKRHLKVSAGMLRFRFRGKSGIEHDVAVSDARVARIVKRCLDLPGQDLFQYLDE
DGERHAVSSSDINDYLREITGADFTAKDYRTWAGSVFALAALRKLEWETVTEARKHVVGT
IKDVAQLLRNTPAVCRKCYVHPAVIEAFEAGELAQAMPASRRNGLKTDEAALAIFLEKDA
KRRTREAARKNRKGAAPSDTRLTRMLAESSRKARAGALKGSGKSAAAQALDHAAKKPAGK
AARPASKKLGRTRTETAVAIS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaaagcagaccaggcgaggcacacggtggcgacgatcgacaaaaacagcgac
gcaggcggcccgcaaggctgccccgaggacttgccgccgggcctgcgctacatggacgat
gcgcggcgcggctacacgcgcgagtggatcgacggcgccttcgcgtacttcaacacgcag
ggcaggcgcatcgacgacgaagccgagattcgccgcatcaatgcgctcgcgattccgccc
gcgtacacggccgtatggatttgtcccgacgcgcgcggccatctccaggcgacggggcgc
gatgcgcgcggacgcaagcagtatcgctatcacccgcaatggcgcgagacgcgcgacgcc
aacaagtacgagcgcatgctcgccttctccgcggtgctgccgaggctgcgcgcccgcgtc
gcgcgcgatctgtcgctcgacggcatgccgcgcgacaaggtgctcgccaccgtcgttcgt
ctgctcgacacgacgctgatccgcgtcggcagcgaagagtacgcgcgcgaaaatcgctct
tacggactgacgacgttgcgaaagcgccatctcaaggtatcggcgggaatgctgcggttc
aggttccggggcaagagcgggatcgagcacgacgtcgccgtgagcgacgcgcgggtcgcg
cgcatcgtcaagcgctgcctggatctgccgggacaggatcttttccagtatctcgatgaa
gacggcgagcggcatgcggtgagctcgtcggacatcaacgattatttgcgcgagatcacc
ggcgcggactttacggcgaaggactaccggacgtgggcgggcagcgtgtttgcgctcgcg
gcgctgcgaaagctcgaatgggagacggtgacggaggcgcgcaagcatgtcgtcggcacg
atcaaggacgtcgcgcaactgctgcgcaatacgccggccgtgtgccgcaaatgctatgtg
catcccgctgtgatcgaggcgttcgaggcgggcgaactcgcgcaggccatgcctgcatcg
cgccgcaacggcctcaagaccgacgaagccgcgctcgcgatcttcctcgaaaaggacgcg
aagcggcgcacgcgcgaggccgcgcgcaagaaccgcaagggcgccgcgccaagcgataca
cgcctcacgcggatgctggcggaatcgagccgcaaggcgcgcgcgggcgcgttgaagggc
agcggcaagagcgcggcggcccaggcgctcgatcacgcggccaagaagccggcgggcaag
gccgcgcgcccggcgtcgaagaagctcgggcgcacgcgcacggagacggcggtggcgatc
agctaa
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