Burkholderia sp. CCGE1001: BC1001_1365
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Entry
BC1001_1365 CDS
T01424
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BC1001_1365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bug03400
]
BC1001_1365
Enzymes [BR:
bug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BC1001_1365
DNA repair and recombination proteins [BR:
bug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BC1001_1365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
RecD_N
SLFN-g3_helicase
DEAD
AAA_22
CbiA
T2SSE
UvrD_C
MukB
Motif
Other DBs
NCBI-ProteinID:
ADX54801
LinkDB
All DBs
Position
1:1556952..1559324
Genome browser
AA seq
790 aa
AA seq
DB search
MSTFNQAPAAPLQLEDIGVNLPAPADFSIALAEGFARRIGALARRAGASGEAVKWAARAA
FAASRATAEGHVCVPLGALAHRFDASAAEVRAALFASGMASDGAYTAAALRPLVIDGQGR
LYLARYYDYERRLARALVAHAGASAVQGRPEVAAERLTGRAGNVAGERRERMAGAGGAEG
GVAGQEAARASAERNAEADADANATQTLHQRLLRYFGPLKDDEVDWQRVAAVVALSGRLT
IVSGGPGTGKTTTVVGVLACLLDARADLRIALAAPTGKAAQRMQEALLARAGDLPPELAA
RLPQTSYTLHRLLGSGPGGRFRHHRDNPLPYDVVVIDEASMIDVAMAAHLLDAIAPHTRL
VMLGDKDQLAAVEAGAVFAELSARPAFTMPGVQRIAGALGIDEARFTQALPRVGHAQDAW
AERSRQDDAADPRRSDSPSDDLFAKSDAAQALDAARNADLFDADANANANANVANPPVNA
SAGASPSPSPSPSPSPSPSPSPSPSPAASPPPHQPPSPLADCVVWLERNYRFGLESPIGR
LSLAIRHGAASAALEVLVADATRHAAELHDDAHPTLAERTVERLAAGFAPYANALAAALA
EATPDPTPLFDGLNRFRVLCATRSGPRGVDQVNALMAAQVRRAAGVTLAVGAQWFAGRPV
MVTRNDYALGLFNGDIGIALPGAGGVLRVYFRTGDGSLRAVSPAALPPHDTAFALTVHKS
QGSEFEHAVLVLPSTFSRVLSRELVYTAITRARERVEVIGARAVLAQAIATPTQRDSGLA
ARIAEASRGR
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgttcaatcaggcgccagccgcgccgctgcaactcgaggacatcggggtcaat
ctgcccgcgccggctgatttcagcattgcgctcgcggagggattcgcgcgccgcatcggc
gcattggcacgacgcgcgggggcgtcgggcgaggcggtgaaatgggcggcgcgcgcggct
ttcgcggcgagccgcgcgacggcggaagggcacgtgtgtgtgccgctcggggcgctcgca
catcgtttcgacgcgtctgccgccgaggttcgcgcggcgctgttcgcgagcggcatggcg
agcgatggtgcgtacaccgccgcggcgttgcggccgctcgtgatcgacggacaagggcgc
ttgtatctcgcgcgttactacgattacgaacggcgtctcgcgcgggcgctggtcgcgcat
gcgggggcgagcgcggttcaaggccggccggaggtcgcggcggagcggctgaccggacgt
gccggcaacgtcgcgggtgagcggcgggagcggatggcgggcgcgggaggcgcggagggc
ggcgttgccggccaggaggcggcgcgcgcgagcgccgaacgcaacgccgaagccgacgcc
gacgccaatgccacacaaacgctgcaccagcggctgctacgctacttcggcccactgaag
gacgacgaggtggactggcagcgcgtggccgcggtcgtggcgctgtcgggccggctcacg
atcgtgagcggcggtccgggcaccggtaagacgacgaccgtcgtcggtgtgctcgcgtgc
ctgctggatgcgcgcgccgatctgcgaatcgcgctcgccgcgcccaccggcaaggcggcg
cagcgcatgcaggaagccttgctcgcgcgcgccggcgatctgccgccggagctcgccgcg
cgtttgccgcagacttcctacacgttgcatcgtctgctcgggtctgggccgggcgggcgc
ttccggcatcatcgggataacccgttgccttacgacgtcgtggtgatcgacgaggcgtcg
atgattgacgtcgcgatggccgcgcacctgctcgatgccattgcgccgcacacgcggctc
gtgatgctcggtgacaaggaccagcttgcagccgtggaggccggtgccgtgttcgcggaa
ctgagcgcgcggcctgcgttcacgatgccgggcgtacagcgaattgcaggcgctctgggt
atcgacgaggcgcggttcacgcaggcgctgccacgtgtcgggcacgctcaggacgcatgg
gccgagcgctcccggcaagatgacgccgccgatccgcgccgttccgacagtccgtccgac
gacctgttcgccaaatccgacgcggcccaggcgctcgacgcagcacgcaacgccgacctc
ttcgacgccgacgccaacgccaacgccaacgccaacgtcgccaacccccccgtcaacgcg
agcgcgggcgccagccccagccccagccccagccccagccccagccccagccccagcccc
agccccagccccagccccgccgcgagcccgccgccgcaccagccgccaagcccactcgcg
gattgcgtcgtctggctggagcgcaactatcgattcgggctcgaatctccaattggccgc
ctttcgctggcgattcgccatggcgcggcgagcgccgcactcgaggtgctggtcgccgac
gccactcgacacgccgccgagcttcacgacgacgcgcaccctacgctggccgagcgcacc
gtcgagcgcctcgccgccggcttcgcgccctacgcgaatgcgctggctgccgcgctggcc
gaggcgacgccggatcccacgccgcttttcgacgggctcaatcgtttccgcgtcctgtgc
gcgacccgctccggcccgcgcggcgtcgatcaggtcaacgcgctgatggcggcgcaagtg
cggcgcgcggcgggcgttacgctcgcggtcggcgcgcagtggttcgccgggcggcccgtc
atggttacgcgcaacgactatgcgctgggactcttcaacggcgacatcggcattgcactg
cccggcgcgggcggcgtgctgcgggtctactttcgtaccggcgacggcagtctgcgcgcc
gtgtcgccggccgcgctgccgccgcacgacaccgcgtttgcgctgacggttcacaagtcg
caaggctccgaattcgagcatgcggtgttggtgctgccgtcgacattcagcagagtgttg
tcgcgtgaactcgtgtacacggcgatcacgcgcgctcgtgagcgcgtggaggtgatcggc
gcgcgcgctgtactggctcaggcgattgcgacgcccacacagcgcgactcgggtctcgcc
gcgagaatcgcggaggcatcgcgtggccgttag
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