Burkholderia sp. CCGE1001: BC1001_4358
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Entry
BC1001_4358 CDS
T01424
Name
(GenBank) Carbohydrate-selective porin OprB
KO
K07267
porin
Organism
bug
Burkholderia sp. CCGE1001
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bug02000
]
BC1001_4358
Transporters [BR:
bug02000
]
Other transporters
Pores ion channels [TC:
1
]
BC1001_4358
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
ADX57759
LinkDB
All DBs
Position
2:845818..847359
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AA seq
513 aa
AA seq
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MKLSNKLTGVITVAIVTLGCSSLSAMASGTDQPAAEAANAASGAAGVPLTGDDIHTSPDV
SVSVNRSLLQAQTETGQNPPTVTSVSAAPPSEGHPPRKGPLSGIGDALEARGINLRLLLT
NLAAANPSTGISTGKSTDYFTLFMGADVDLEKLVGIPNTRFHITEAWEPPSHNTVSFTTQ
TGSAFTPLVQQTTTNDLIKFTLSHDLFEKRLHVEYGRMNLTDDFFLSSMCAGCVVSTPAI
TLNVPGITKSLWGARVAYLLSSHTRLGLGVVEDNSTLFMNSTGWNWSTRSRTGVIGIANV
MYTTDFSDTRYPLNAEAGVYHNTSPYTDDLHNVDGSSQVLNPSGTALKHGNGTWGFYGQA
RKVIWTAPGSEGPVPPNVALYGGAFITPGPGQSFPVEAYGGAEYGGFLRNNPAALVGSVI
RYIQLSRGRALYEQQLSTVSGWSRDGVNRNTFSFDVHAQYGLAPGVLVNGFAQYLLHPNR
MHPLAATGSTRSGWMIGLSLLIDLGRVTGLTSP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaaactatccaataagctgacgggcgttatcacagtagcgatcgtgactctaggatgc
tcatcgcttagcgcaatggcatcaggtaccgaccagccggccgctgaggcagccaacgcg
gcaagcggagcagcgggcgtgccgctcacgggcgatgacatccacacctcccccgatgtc
tcggtgtctgtcaaccgaagtctcctgcaggcgcagacggaaaccggccaaaatccaccc
acagtcaccagcgtaagcgcagccccacccagcgaggggcacccacccagaaaagggccg
cttagcggcatcggcgatgcgcttgaggcccgcggaatcaaccttcgcctgcttttgaca
aacctggctgccgcgaacccttcaactggcatctcgacgggaaaatcaaccgactacttc
acactctttatgggggccgatgtcgacctggagaagctcgtggggattcctaatacgcgg
tttcatatcactgaggcttgggagccgccttctcacaacacagtaagcttcaccactcag
accggatccgcctttacgccgcttgttcagcaaaccaccaccaatgacttgatcaagttc
acgctatcgcatgacctatttgaaaagcgactccacgtcgaatacggtcgcatgaacctg
acggacgatttcttcctgtcgtcgatgtgcgcaggatgtgtagtgtcgactcccgctatc
acactcaacgtgccaggcatcacaaaatcgttgtggggggcacgggtcgcgtacttactc
tcgagccatacccgtctggggctcggcgtggtcgaagacaactccactcttttcatgaac
tctactggctggaactggagcacccggagcaggacgggggttataggtatcgcaaatgtc
atgtacacgactgatttctctgacacccggtatcccctcaacgctgaagccggggtatat
cacaacacgagtccttacacggacgatctgcacaacgtggatgggtcaagtcaggtcctc
aatccttcgggcactgcactcaaacacggcaacggtacatggggattctacggtcaggca
agaaaagtcatctggaccgctccgggatcagaaggccctgttccccctaatgtcgcgctg
tacggcggtgcgtttatcacacccggccctggccagtccttcccggtcgaagcgtatggt
ggagcggagtacggcggctttctcagaaacaatccagcggcgctggtgggatcggttatt
cgttatatccagttgagccgcgggcgcgcgctttatgagcagcaactcagtacggtgagc
ggttggagccgcgacggtgttaaccgcaacacattctctttcgatgtacacgcacagtac
gggctcgctcccggggtactcgtcaatggttttgctcaatatcttctgcacccaaacaga
atgcacccattggccgccaccggttcaacccgaagcggctggatgatcggcttgtcactt
cttatcgatcttgggcgtgtgacggggctgacaagcccttaa
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