Burkholderia sp. CCGE1001: BC1001_5565
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Entry
BC1001_5565 CDS
T01424
Name
(GenBank) Carbohydrate-selective porin OprB
KO
K07267
porin
Organism
bug
Burkholderia sp. CCGE1001
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bug02000
]
BC1001_5565
Transporters [BR:
bug02000
]
Other transporters
Pores ion channels [TC:
1
]
BC1001_5565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
ADX58939
LinkDB
All DBs
Position
2:complement(2206327..2207859)
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AA seq
510 aa
AA seq
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MKLVRSIRRVAPLPAGRGLTSQSGRTARHARLLSLRRTALYTALGWASLCGAAMAQTGAG
SAADGKPANDADANRTSASEAGLWSREQLFGDMGGLRPWLGQYGVTFALTETSELLGNLR
GGLARGVAYDGLTTATVQLDTDKAFGLPGGQFNVSALQIHGRNLSSDKLGTLNTASGIEA
DDATRLWELWYQQSFLNKRIDVKIGQQSIDQEFISSTYSALFLNTMFGWPALPSYDMPSG
GPAYPLSALGVRVRGQITSSLTALAGVFDGDPLGNNPNNRSGTNFNLHNGTLFIGELQYA
INQPADSSEGATQGPARVGLPGAYKIGIWYNNGRFADPRYDGNGVSLASPASTGVAANHR
GDYSFYAVADQMIWRPNPGEARSLGVFARVMGAPGDRNLVSLAANLGVVLKAPFAGRDND
SAGLALSYIKVGSHARGIDQDNLAMSGGPYGVRTSETALEATYQYQIAPWWMLQADAQYT
FNAGAGQNPNDPTKPLRNTFMVGLRTNIAF
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtccgatccattcgacgcgtcgcgccgttgcctgccggtcgcggcctcacg
tcgcagagcggcaggaccgcccggcacgcgcgcctgctgtcgctgcgccgcacggcgcta
tataccgcgctcggatgggcttcgctgtgcggcgcagccatggcgcagaccggcgccggt
tccgccgccgacggcaagccggcaaacgacgccgatgcgaacaggacatcggcgagtgaa
gcgggcttgtggagccgcgagcagctcttcggcgacatgggcggtctgcgtccatggctc
ggccagtatggcgtgacattcgcgctgaccgaaacgagcgaactgcttggcaacctgcgc
ggcggccttgcgcgcggcgtcgcatacgacggcctgaccaccgcgacggtgcaactggat
acggacaaggcattcggcttgccgggcggccagttcaacgtcagcgccctgcagattcat
gggcgcaatctcagcagcgacaaactgggcacgttgaacaccgcaagcgggatcgaagcg
gacgacgcgacgcgactttgggagctgtggtatcagcagtcgttcctgaacaaacgcatc
gacgtgaagatcggtcagcagagtatcgatcaggagttcatctccagcacctactccgcg
ctcttccttaacacgatgttcggctggcccgcgctgccttcgtacgacatgccctcgggc
ggccccgcgtatccgctgtcggcgctcggcgtgcgcgtgcgcggacagatcacgtcttcg
ttgacggcactcgcgggcgtgttcgacggcgatccgctcggcaacaatccgaacaaccgc
agcggcaccaacttcaatctgcataacggcacgcttttcatcggcgagctgcagtatgca
atcaatcaacctgccgacagcagtgaaggcgcgacgcaagggccggcccgggttggcctg
ccgggcgcgtacaagatcggcatctggtacaacaacggccgcttcgcagatccgcgctac
gacgggaacggtgtgtcgctcgcgagccccgcgtcgacgggcgtggcggcgaaccatcgc
ggcgactacagcttctacgcggtggccgaccagatgatctggcgcccgaaccccggcgag
gcacgcagcctcggcgtattcgcgcgggtgatgggcgcgcccggcgaccgcaacctggtg
agcctcgcggccaatctcggcgtcgtgttgaaagcgccgttcgccggccgcgacaatgac
agcgccggtcttgcgctgagctatatcaaggtcggcagccacgcgcgcggaatcgatcag
gataacctggcaatgagcggcggcccgtacggcgttcgcaccagtgaaacggcgctcgag
gcgacgtaccagtatcagatcgctccctggtggatgctgcaagccgacgcgcaatacacg
ttcaatgcgggcgccggccaaaatcccaacgatccgacgaagccgctgcgcaacaccttc
atggtcggcctaagaacgaatatcgcgttctga
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