Stenotrophomonas maltophilia JV3: BurJV3_2838
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Entry
BurJV3_2838 CDS
T01596
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
buj
Stenotrophomonas maltophilia JV3
Brite
KEGG Orthology (KO) [BR:
buj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
buj03016
]
BurJV3_2838
Enzymes [BR:
buj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BurJV3_2838
Transfer RNA biogenesis [BR:
buj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BurJV3_2838
Prokaryotic type
BurJV3_2838
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AEM52157
LinkDB
All DBs
Position
complement(3111462..3112370)
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AA seq
302 aa
AA seq
DB search
MTRIQFRRLDGILLLDKSNGMSSNAALQVARRLFRAEKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLGSAKAYDAEIVLGQTTDTDDAEGQVLLQRPVPAISAEALQAALAPLTGNIRQ
RAPIYSALKQGGEPLYVKARRGDAIEAPEREVQVHAIEVLEQQPERLRLRVTCGSGTYIR
SLARDLGESLGCGAHISALRRLWVEPFREPAMVTLDQLRAMVEAGDEAGMDALLLPLAAG
LAEYPRVDLDADQAHRFCVGQRQRDLSWPRGLVAVFGPDDAVQGLGQVDDSGLLAPQRRF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattcagttccgccgcctggatggcatcctgctgctcgacaagtcgaacggc
atgagctccaacgctgccctgcaggtggcacgccgcctgttccgcgccgagaaggggggc
cataccggcagcctcgacccgctggccaccggcctgctgccgctgtgtttcggcgaggcg
accaagatcgcgggcctgctgctgggttcggccaaggcctacgacgccgagatcgtgctc
ggccagaccaccgataccgacgatgccgaaggccaggtactgctgcagcgcccggtaccg
gcgatcagtgccgaggccctgcaggctgcgctggcgccgctgaccggcaacatccgccag
cgtgccccgatctattcggcgctgaagcagggtggggaaccgctgtatgtgaaggcccgc
cgcggtgacgccatcgaagcgcccgaacgcgaggtgcaggtgcacgccatcgaggtgctg
gagcagcagccggaacggctgcggctgcgcgtgacctgtggttccggcacctatatccgc
agcttggcccgcgacctcggcgaaagcctgggctgtggcgcccacatcagcgccctgcgc
cggctctgggtcgagccgttccgcgagcctgccatggtcacgctggaccagctgcgggcg
atggtcgaggccggtgacgaggccggcatggatgcgttgctgctgccgctggcggccggc
ctggctgaatacccgagggtcgacctggatgccgaccaggcccatcggttctgcgtcggc
cagcgccagcgcgacctgtcctggccgcggggcctggtggccgtgttcggtccggacgat
gctgtccagggcctcggccaggtcgacgacagtggcctgctggccccgcagcgccgtttc
aacctttga
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