Burkholderia sp. HB1: AC233_20705
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Entry
AC233_20705 CDS
T04094
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
buq
Burkholderia sp. HB1
Brite
KEGG Orthology (KO) [BR:
buq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buq03032
]
AC233_20705
03400 DNA repair and recombination proteins [BR:
buq03400
]
AC233_20705
Enzymes [BR:
buq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AC233_20705
DNA replication proteins [BR:
buq03032
]
Prokaryotic type
DNA Topoisomerases
AC233_20705
DNA repair and recombination proteins [BR:
buq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AC233_20705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ALE56903
LinkDB
All DBs
Position
2:151828..153198
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AA seq
456 aa
AA seq
DB search
MAMTNSTTQNGHASTDDSAKQAAPAAMPPGLRHADDSKPGYTRKREKEGFAYFDVEGKRI
EDEAEIQRINSLAIPPAYEDVWICPDPRGHIQATGRDVRGRKQYRYHPRWRETRDADKYE
RMAEFGRALPRIRARVARDLELPGMPADKVFAAVVRLLDTTLVRVGSVEYARENQSYGLT
TLRKKHVKVEAGQLRFRFRGKSGIEHDVTVDDPRVKRIVRRCAELPGHDLFQYLDEDGTR
RTVGSADINDYLRRASGADFTAKDYRTWAGSVYALATLRRLVCESATEARRHIVATVKEV
AGLLRNTPAVCRRCYIHPAVISAFEADELQTLPPGQSRRGLKVDEVAFAALLAHAEKRAA
KLARQAGAKGRKLREAQAADSINGSISTLLQKSRVIRKEANKAAAKAGAKTGRAARAKVN
EEVTGKASRKTGARSTRRAAGERVGSPQSADKPAAS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctatgacgaacagcacaactcaaaacggtcatgcatcgaccgacgacagcgcgaag
caggccgcgcccgccgcgatgccgcctggtttgcgccacgccgacgacagcaagcctggc
tacacacgcaagcgcgagaaagaaggcttcgcgtatttcgacgtcgaaggaaaacgcatt
gaagacgaagcggaaatccagcgcatcaactcgcttgcgattccgcccgcctatgaggac
gtatggatttgccccgatccgcgcggccacattcaggcgaccggacgcgacgtgcgcggc
cgcaagcaataccgttatcacccgcgctggcgcgaaacgcgcgacgcggacaagtacgaa
cgcatggcggaattcggccgcgcgttgccaaggattcgcgcccgcgtcgcgcgcgatctc
gaactgccgggcatgcctgccgacaaggtgttcgcggccgtcgtgcggctgctcgatacg
acgcttgtgcgcgtcggcagcgtcgaatatgcgcgcgaaaatcagtcatacggtttgacg
acgctgcgcaagaaacatgtgaaggtcgaagcgggacagttgcgtttcaggtttcgcggc
aagagcggcatcgagcacgacgtcacggtcgacgacccgcgcgtgaagcgcatcgtgcgg
cgctgtgcggaactgccggggcacgacctgttccagtatctcgacgaggacggcacgcgc
cgcaccgtcggctctgccgacatcaacgactatctgcgccgtgcaagcggcgcggacttc
accgcgaaagactatcggacatgggccggcagcgtgtatgcgctcgcaacgctgcggcgc
ctcgtgtgcgagagcgccacggaagcgcggcgccatatcgtcgcgaccgtgaaggaagtc
gcgggcctgctgcgcaatacgcccgctgtctgccggcgctgctatatccatccggccgtc
atcagcgcattcgaagccgacgaattgcagaccttgccgccgggccagtcgaggcgcggt
ctgaaagtggacgaagtggcgtttgccgcgttgctcgcacatgcggaaaaacgcgcggcg
aaactcgcgcgtcaggcgggcgcgaagggccgcaagctgcgcgaagcacaagccgccgac
agcatcaacggctcgatttcgacgctgcttcagaagtcgcgtgtgattcgcaaggaagcg
aacaaggccgcggcgaaagccggcgcaaaaaccggccgggctgctcgcgctaaggtcaac
gaggaagtcaccggaaaagccagccggaaaaccggcgcgcgaagcacgcggcgagccgcg
ggggagcgcgtcggctcgccgcagtccgcggacaaacccgcagcgagttga
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