Paraburkholderia phytofirmans OLGA172: AYM40_18150
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Entry
AYM40_18150 CDS
T05111
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Pathway
buz00300
Lysine biosynthesis
buz00550
Peptidoglycan biosynthesis
buz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AYM40_18150
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AYM40_18150
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
buz01011
]
AYM40_18150
Enzymes [BR:
buz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AYM40_18150
Peptidoglycan biosynthesis and degradation proteins [BR:
buz01011
]
Precursor biosynthesis
Amino acid ligase
AYM40_18150
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ANB74080
UniProt:
A0A160FN39
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All DBs
Position
1:complement(4134147..4135709)
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AA seq
520 aa
AA seq
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MSALRKKHPAHRQIADALNWLHARVQPGAHLHADTRSLAAGDAFFAYAVDGADNRPFIDG
AIERGAAAVLVQPEGFSGAIDPSTTLAVPALNELAGSIASAWYNDPSDGMLAVGITGTNG
KTSCSQWIAAALTALGKRCAIVGTLGTGLPGQLVHTGFTTPDAPQLQRSLAQLRDAGAQA
VAMEVSSHALHQGRVNGTAFDIAVFTNLTQDHLDYHGTFEAYETAKARLFAWPDLRAAVI
NRDDAAGRRLLASTKGHARTLAYGLDEALKDAPQADASDADALLLASNVRATATGTAFHL
TTSDWGDADVEVQTLGAFNVSNLLGVLGALLAADVPFDAALAELAKLEPVNGRMQRLGGR
LQNDEPLVVIDYAHTPDALEKTLEALRPMAVARGGELICMFGCGGDRDATKRPLMGAIAE
KIADGVVVTSDNPRSEDPQSIIEQIAAGMKDASKARRIEDRASAILQAIRSAAREDVIVL
AGKGHEATQEIMGKKRAFSDQDHARLALAARATHARGGGE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctgcgtaagaagcatccagcgcaccggcagatcgccgacgcactcaactgg
ttgcacgcacgcgtgcagccaggcgcgcatctgcacgccgacacgcgctcgcttgcggcg
ggcgacgcgtttttcgcctatgcggtcgacggtgcggacaaccgcccgttcatcgacggc
gcgatcgagcgtggcgcggcagccgtgctggttcagcccgaaggctttagcggcgcgatc
gatccgtccacgacgctggccgtaccggcgttgaacgaactcgctggttcaattgcgagc
gcctggtataacgatccgagcgacggcatgctggcggtcggcatcaccggcaccaacggc
aaaacgtcgtgcagccaatggattgccgcggcgctgaccgcgctcggcaaacgttgcgcg
atcgtcggtacgctcggcaccggtctgccgggtcaactcgtacacactggcttcacaacg
cctgatgcaccgcaactgcaacgcagtctcgcgcagctacgcgacgccggcgctcaagcg
gtggcgatggaagtgtcgtcgcacgccttgcatcaaggccgcgtgaacggcacggcgttc
gacatcgccgtgttcacgaatctcacgcaagaccacctcgactatcacggcacgttcgaa
gcctacgaaactgccaaagcgcgtttattcgcatggccggacttgcgtgccgcggtgatc
aaccgtgacgatgcggccggccgccgcctgctcgcaagcacgaagggtcatgcacgcacg
ctcgcttacggcctcgacgaagcgctcaaagacgcgccgcaagccgatgcgtcggacgcc
gatgcgttgctgctcgcctcgaatgtgcgcgcaaccgcgaccggcaccgcgtttcatctg
accacatcggactggggcgacgccgacgtcgaagtgcaaacgctcggcgcattcaacgtc
agcaatttgctcggcgtactcggcgcgttgcttgccgccgacgtgccctttgacgccgcg
cttgccgaactggcgaagctcgagccggtaaatggccgcatgcagcgtctaggcggccgt
ttgcagaatgatgagccgctcgtcgtgatcgactacgcgcacacgccggatgcgctggaa
aagaccctggaagcactgcgtccgatggcggtcgcgcgcggtggcgaactgatctgcatg
ttcggctgcggcggcgatcgcgacgcgaccaagcgtccgctgatgggcgcgatcgccgag
aagatcgccgacggcgtcgtcgtgactagcgacaacccgcgcagcgaagatccgcaatcg
atcatcgagcagatcgccgcaggtatgaaagacgcgtcgaaggcccgtcgcatcgaggac
cgcgcaagcgcgatcctgcaggcgatccgcagcgccgcacgcgaagacgtcatcgtgctg
gccggcaaggggcacgaagcaacacaggaaatcatgggtaagaaacgcgctttctccgat
caggaccatgctcgccttgcgctcgccgcacgggcgacgcacgcacgcggaggtggcgaa
tga
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