Bombus vancouverensis nearcticus: 117156811
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Entry
117156811 CDS
T07628
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117156811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvan03041
]
117156811
Spliceosome [BR:
bvan03041
]
Complex A
U1 snRNP components
U1 related factors
117156811
Complex B
117156811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
DP-EP
Motif
Other DBs
NCBI-GeneID:
117156811
NCBI-ProteinID:
XP_033190070
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MASNDSIPPPTAVPGFPPATPNIASTFVPPIMPTAPFIPPPSLPPGPPGIMPPQFSIPPP
GFSFPITAAPPPDAGVIAAPPQITAPGIPPPAPIASEATSGVQPIATTEKKTDWTEHKAP
DGRTYYYNSATKQSLWEKPDELKTPSELLLSQCPWKEYKSENGKVYYHNVTTKESRWTIP
TELEELKARIAAEEAAAAAAAVVASATNTIVPAGIQHLSPNVAIANTSQTSTPEPGGKSA
IEQAMAATLAAINIPTPPAKPDEDSNSAKGSANDSRTSTPEPKMQFKDKKEAIEAFKELL
RERDVPSNATWEQAVKLIQSDPRYPQMKKLNERKQAFNAYKTQKLKEEREQERLRLKKAK
EDLEQFLLENDRMTSTTKYYKCEEMFGNLEVWRAVGDSDRRDIYEDVIFNLAKREKEEAK
QLKKRNTKRLAQVLDTMTDVTYRTTWQEAQALLLQHAAFAEDADLLEMDKEDALLVFENH
IRQLEKDEEEEKEHEKKRRKRQERKNRDAFISLLDELHEQGKLTSMSLWVELYPMLSADL
RFSAMLGQSGSTPLDLFKFYVEDLKSRFHDEKKIIREILKDKNFEVQVNTTFEEFATVVC
EDRKSATLDAGNVKLTYNLLLEKAEAREKERVKEETRKFKKLETGFKNLLKTLNVDYQMT
WDDVRSKIEEEPDFKAITLESERVRIFKEYQHELEESCSHHHIRSKKKKTKKVKRKSRSR
SHSESEGSDKGLKKKRHKSRSPSVPSKSDSSESDTRKSKKKKSKKKRGRSHSRSHSRLPS
SEESPERKRKEEKHRRPSAHSEGSVTENAEHHELSEDELEKQRAQLLRELQMQQEDN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatgatagtatacctccacctactgcggtaccagggtttccaccagcgact
ccaaatattgcttccacttttgtgccacctattatgcctactgcaccttttatacctcct
cccagtttaccacctggtccacccggtataatgcctccacagttttctatacctccacca
ggttttagttttccaattactgctgctcctccacctgatgctggagtcatagctgcacct
cctcaaataacggcaccaggtattcctccacctgcacctatagcaagtgaagccacatca
ggtgttcaacctattgcaacaacagaaaaaaagactgattggactgaacataaagctcct
gatggaaggacgtattattataatagtgctacaaaacaatctttgtgggagaaaccagat
gagctaaaaacacccagtgaattgcttttatcacaatgcccttggaaagaatataaatca
gagaatggaaaagtatattatcataatgtgacaactaaggaatctaggtggactattcct
acagagctagaagaactaaaagcaagaatcgcagctgaagaggctgcagctgcagctgca
gcagttgttgcaagtgctacgaatactatagttcctgcaggtattcaacatttatctcca
aatgttgcaattgcgaatacatctcaaactagtacaccagaaccaggtggaaaatctgca
attgaacaagccatggctgcaactcttgcagcaataaacattcctactccacctgcaaag
ccagatgaagatagcaattctgcaaaaggatcagcaaatgatagtcgtaccagtactcct
gaaccaaaaatgcaatttaaagataagaaggaagcaattgaagcatttaaagaattgtta
agagaaagagatgttccatcaaatgctacatgggaacaggcagtgaaattaatccaaagt
gatcctagatatccacaaatgaaaaaattaaatgaacgtaaacaagcattcaacgcatat
aagacacagaaacttaaagaagaacgtgagcaagaaagattaagattgaagaaagctaag
gaagatttagaacaatttttattagaaaatgatagaatgacaagtacaacaaagtattat
aaatgtgaagaaatgtttggtaatttggaagtgtggagggctgttggtgattcagatcgc
cgggatatttatgaggatgttatttttaatttagccaaacgtgaaaaagaagaagcaaaa
cagttaaaaaagagaaatactaaaagactagctcaagttttagatactatgactgatgtt
acatatagaactacttggcaagaagcacaagcattacttttacaacacgcagcttttgca
gaagatgcagacttactagaaatggataaagaggatgcattacttgtttttgaaaatcat
atacgtcaactagaaaaggatgaagaagaagagaaagaacacgagaaaaaacgtagaaaa
agacaagaacgaaagaacagagacgcatttataagtttgttggatgagcttcatgaacaa
ggaaaattaacatccatgtcattgtgggtagaactttacccaatgttatctgctgattta
agattttcagctatgcttggacaatctggatcaactccactagatttgtttaaattttac
gttgaagatttgaaatctagatttcatgacgaaaagaaaattatcagagaaattctgaaa
gataaaaattttgaagtgcaagttaatactacttttgaagagtttgctacagtcgtatgt
gaggatcgaaaatctgcaacattagatgcgggcaatgtaaaattaacgtacaatttatta
cttgaaaaagctgaagcccgagagaaagaacgtgtaaaggaagaaaccagaaagtttaag
aaattagaaactggctttaaaaatttactaaaaactcttaatgttgattatcaaatgacg
tgggacgatgtaagaagtaagattgaagaagaaccagattttaaagcaataacattagaa
agcgagagagttagaattttcaaggaatatcaacatgaacttgaagaaagctgtagtcat
catcacattagaagtaaaaaaaagaaaacaaaaaaggtgaaacggaagtcacggtcgcga
tcacatagtgagtctgaaggtagtgataaaggtttgaagaaaaaaagacataaatcaaga
tcaccaagtgttcctagcaaatcggatagttccgagtctgatactagaaaatcaaaaaag
aagaagagtaaaaagaagagaggtcgtagtcattcccgatcacattcgagacttccgtct
tctgaagaatcaccagaaagaaaacgaaaggaagaaaaacatagaagaccttctgcacat
agtgaagggtctgttactgaaaatgctgaacatcatgaactttcagaggatgagttggaa
aaacaaagggcacaactattacgtgaattacaaatgcaacaagaagacaattga
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