Bombus vancouverensis nearcticus: 117159973
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Entry
117159973 CDS
T07628
Name
(RefSeq) histone deacetylase HDAC1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03082
ATP-dependent chromatin remodeling
bvan03083
Polycomb repressive complex
bvan04213
Longevity regulating pathway - multiple species
bvan04330
Notch signaling pathway
bvan04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117159973
03083 Polycomb repressive complex
117159973
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117159973
04350 TGF-beta signaling pathway
117159973
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
117159973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bvan03036
]
117159973
Enzymes [BR:
bvan01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
117159973
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
117159973
HDAC complexes
Sin3A-HDAC complex
117159973
BRAF-HDAC complex
117159973
REST complex
117159973
SHIP complex
117159973
MiDAC complex
117159973
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
117159973
Heterochromatin formation proteins
Other heterochromatin formation proteins
117159973
Chromatin remodeling factors
NuRD complex
117159973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
117159973
NCBI-ProteinID:
XP_033196181
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MTTLPHTKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQPIPEDGAVIEDSEAEEKVNPDERLPQRDLDKRIQHENE
YSDSEDEGEGGRRDNRSFKSSRKRPRLEKGQEGIESDLKKEEDIKSEPKENEKDEKTNVT
NEETKKDGGSNP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgttgccacataccaagaagcgtgtctgctactactatgatagtgatattgga
aattattattatggacaaggacatcctatgaagccacatcgtataaggatgacacataat
ttacttttgaattatggtctttataggaagatggaaatatatcgtccacataaagctaca
gcagatgaaatgacaaaatttcatagcgatgactatattaggtttttgagatcaataaga
cctgataacatgtcagagtataacaaacaaatgcaacgatttaatgtaggagaagattgc
cctgtctttgatggtttatatgaattttgtcaattatcagctggaggttctgttgctgct
gctgtgaaacttaacaaacaggcctcagaaatttgcataaattggggtggtggtttgcat
catgccaaaaaaagtgaagcatctggattttgttatgtaaatgacattgtattaggaata
ctggaattgctcaaatatcatcaaagagtactatatattgatattgatgttcatcatgga
gatggtgtagaagaagctttttataccaccgatagagttatgacggtttcttttcataaa
tatggtgaatattttcctggtactggtgatctgcgtgatattggtgctggaaagggaaag
tattatgcagtcaatataccactaagagacggtatggatgacgaaagctatgagtcaata
tttgtacctattatttctaaagtgatggaaactttccagccttctgctgtggtcctacaa
tgtggtgctgattcattaactggagatcggttaggctgtttcaatttaacagtgaggggt
catgggaaatgtgttgaatttgtaaaaaaatataatctacccttcttaatggttggtggt
ggtggatatacaattagaaatgtatctagatgttggacatatgaaacttcggttgctctt
ggttctgaaattgcaaatgagttaccctataatgattactttgaatattttggtcctgat
tttaagctgcacattagtccttcaaacatggcaaatcaaaatactcctgaatatcttgaa
aagattaaaaccagactgtttgaaaatttaagaatgttgccgcatgccccaggtgtgcag
gttcaaccaattccagaagatggtgcagtcattgaagattcagaggctgaggaaaaagta
aatccagacgaaagattaccacaacgagatttagataaaagaatacaacacgaaaatgaa
tatagcgacagtgaggatgaaggtgaaggggggcgaagagataataggtcatttaagagt
tccagaaaacgaccacgtctagaaaaaggacaagaaggtatagaaagtgatctaaaaaaa
gaagaagacataaaatcagaaccaaaagaaaatgagaaagatgagaaaacgaatgttaca
aatgaggaaacgaagaaagatggtggatcgaatccctga
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