KEGG   Bombus vancouverensis nearcticus: 117159973
Entry
117159973         CDS       T07628                                 
Name
(RefSeq) histone deacetylase HDAC1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bvan  Bombus vancouverensis nearcticus
Pathway
bvan03082  ATP-dependent chromatin remodeling
bvan03083  Polycomb repressive complex
bvan04213  Longevity regulating pathway - multiple species
bvan04330  Notch signaling pathway
bvan04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117159973
   03083 Polycomb repressive complex
    117159973
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    117159973
   04350 TGF-beta signaling pathway
    117159973
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    117159973
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bvan03036]
    117159973
Enzymes [BR:bvan01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     117159973
Chromosome and associated proteins [BR:bvan03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     117159973
   HDAC complexes
    Sin3A-HDAC complex
     117159973
    BRAF-HDAC complex
     117159973
    REST complex
     117159973
    SHIP complex
     117159973
    MiDAC complex
     117159973
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     117159973
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    117159973
  Chromatin remodeling factors
   NuRD complex
    117159973
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 117159973
NCBI-ProteinID: XP_033196181
LinkDB
Position
Unknown
AA seq 492 aa
MTTLPHTKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQPIPEDGAVIEDSEAEEKVNPDERLPQRDLDKRIQHENE
YSDSEDEGEGGRRDNRSFKSSRKRPRLEKGQEGIESDLKKEEDIKSEPKENEKDEKTNVT
NEETKKDGGSNP
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgacgacgttgccacataccaagaagcgtgtctgctactactatgatagtgatattgga
aattattattatggacaaggacatcctatgaagccacatcgtataaggatgacacataat
ttacttttgaattatggtctttataggaagatggaaatatatcgtccacataaagctaca
gcagatgaaatgacaaaatttcatagcgatgactatattaggtttttgagatcaataaga
cctgataacatgtcagagtataacaaacaaatgcaacgatttaatgtaggagaagattgc
cctgtctttgatggtttatatgaattttgtcaattatcagctggaggttctgttgctgct
gctgtgaaacttaacaaacaggcctcagaaatttgcataaattggggtggtggtttgcat
catgccaaaaaaagtgaagcatctggattttgttatgtaaatgacattgtattaggaata
ctggaattgctcaaatatcatcaaagagtactatatattgatattgatgttcatcatgga
gatggtgtagaagaagctttttataccaccgatagagttatgacggtttcttttcataaa
tatggtgaatattttcctggtactggtgatctgcgtgatattggtgctggaaagggaaag
tattatgcagtcaatataccactaagagacggtatggatgacgaaagctatgagtcaata
tttgtacctattatttctaaagtgatggaaactttccagccttctgctgtggtcctacaa
tgtggtgctgattcattaactggagatcggttaggctgtttcaatttaacagtgaggggt
catgggaaatgtgttgaatttgtaaaaaaatataatctacccttcttaatggttggtggt
ggtggatatacaattagaaatgtatctagatgttggacatatgaaacttcggttgctctt
ggttctgaaattgcaaatgagttaccctataatgattactttgaatattttggtcctgat
tttaagctgcacattagtccttcaaacatggcaaatcaaaatactcctgaatatcttgaa
aagattaaaaccagactgtttgaaaatttaagaatgttgccgcatgccccaggtgtgcag
gttcaaccaattccagaagatggtgcagtcattgaagattcagaggctgaggaaaaagta
aatccagacgaaagattaccacaacgagatttagataaaagaatacaacacgaaaatgaa
tatagcgacagtgaggatgaaggtgaaggggggcgaagagataataggtcatttaagagt
tccagaaaacgaccacgtctagaaaaaggacaagaaggtatagaaagtgatctaaaaaaa
gaagaagacataaaatcagaaccaaaagaaaatgagaaagatgagaaaacgaatgttaca
aatgaggaaacgaagaaagatggtggatcgaatccctga

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