Bosea vestrisii: QO058_06420
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Entry
QO058_06420 CDS
T09164
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bves
Bosea vestrisii
Pathway
bves02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bves00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QO058_06420 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bves03021
]
QO058_06420 (rpoD)
Transcription machinery [BR:
bves03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QO058_06420 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Phage_DsbA
DUF4168
Spermine_synth
Motif
Other DBs
NCBI-ProteinID:
WID97881
LinkDB
All DBs
Position
complement(1302533..1304545)
Genome browser
AA seq
670 aa
AA seq
DB search
MATKVSERDKSEAGSPEAPPSPDSPLLDLTDQAVKRMIKLAKKRGYVTYDELNEVLPSEE
FSSEQIEDVLGQLSEQGINVVDNEDPEAAGEERAARGKEGEEDEAEGGDLVEASRPSLPV
ETKRNLEPTERTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQ
AIIIWRDELMEGKVLLRDIIDLEATYAGPDGKNPDQMPGEGEEPAEAEEAAPEGEAPPEG
MDDDDMENNVSLSAMEAELKPRVLETFDSIASNYTKLRRLQDQDIANRLENTKLSPSQDR
KYKKLKDDIITAVKSLSLNNNRIEALVEQLYDINKRLISHETRLLRLAESYGVGREDFLK
QHIGAELDPKWLLRVSKLGSRGWREFVAQEKERIRELREDVHTLASETGLEIQEFRKIVL
MVQKGEREARQAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRR
GYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEEL
AEKLAMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAILPIDAAIQSNLRET
TTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSR
SRKLRSFLDN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaaagtgagcgagcgggacaagtccgaagcgggttccccggaagcgcccccg
agcccggacagccccctgctggatctcaccgatcaggccgtcaagcggatgatcaagctc
gccaagaagcgcggctatgtcacctatgacgagttgaacgaagttcttccctcggaggag
ttctcctccgagcagatcgaggacgtcctcggccagctcagcgagcagggcatcaacgtc
gtcgacaacgaggatccggaagctgccggcgaggagcgggccgcgcgcggcaaggaaggc
gaagaggacgaggccgaaggcggcgatctcgtcgaggcttcgcgtccgtctctgccggtc
gagaccaagcgcaatctcgagccgaccgagcgtaccgacgatccggtgcggatgtatctg
cgcgagatgggctcggtcgagctgctctcgcgtgagggcgagatcgcgatcgccaagcgc
atcgaggccggccgcgaggcgatgatcgcagggctctgcgagagcccgctgaccttccag
gcgatcatcatctggcgcgacgagttgatggagggcaaggtcctcctgcgcgacatcatc
gacctcgaagcgacctatgccggccccgacggcaagaatccggaccagatgccgggtgag
ggtgaggagccggccgaggccgaggaggctgcgcctgagggcgaggccccgcccgagggc
atggacgacgacgacatggagaacaacgtgtcgctctcggccatggaagccgagctcaag
ccgcgcgtgctggagaccttcgactcgatcgccagcaactacacgaagctgcggcgcctg
caggaccaggacatcgccaaccggctggagaacaccaagctctcgccgtcgcaggatcgc
aaatacaagaagctgaaggacgacatcatcaccgcggtgaagtcgctttcgctcaacaac
aaccgcatcgaggcgctggtcgagcagctctacgacatcaacaagcgcctgatctcgcac
gagacccgcctgctgcgcctggccgagagctatggcgtcggccgcgaggacttcctgaag
cagcatatcggcgccgagctcgatccgaagtggctgctgcgcgtctccaagctcggctcg
cgcggctggagggagttcgtcgcgcaggagaaggagcgcatccgcgagctgcgcgaggac
gtccataccctggcgtcggagaccggcctggagatccaggagttccgcaagatcgtgctg
atggtccagaagggcgagcgcgaggccaggcaggcgaagaaggagatgatcgaggccaat
ctgcgtctcgtgatctcgatcgccaagaagtacaccaaccgcggcctgcagttcctcgac
ctcatccaggaagggaacatcggcctgatgaaggcggtcgacaagttcgagtaccgccgg
ggttataagttctccacgtacgctacatggtggatccggcaggcgatcacccgttcgatc
gccgaccaggcccgcaccatccgcatcccggtgcacatgatcgagacgatcaacaagatc
gtccggacctcgcgccagatgctgcacgagatcggccgcgagccgaccccggaggagctg
gccgagaagctcgccatgccgctggagaaggtgcgcaaggtcctgaagatcgccaaggag
ccgatctcgctggagaccccgatcggcgacgaggaggattcgcatctcggcgacttcatc
gaggacaagaacgcgatcctgccgatcgatgcggcgatccagagcaatctacgcgagacc
acgacgcgcgtgctcgcctcgctcaccccgcgcgaggagcgcgtgctgcgcatgcgcttc
ggcatcggtatgaacaccgaccacaccctcgaagaggtcggccagcagttcagcgtcacc
cgcgagcgcatccggcagatcgaggcgaaggcgctgcgcaagctcaagcacccgagccgc
agccggaagctcaggagcttcctggacaactag
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