KEGG   Beta vulgaris (sugar beet): 104898541
Entry
104898541         CDS       T03548                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
bvg  Beta vulgaris (sugar beet)
Pathway
bvg03013  Nucleocytoplasmic transport
bvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104898541
  09122 Translation
   03013 Nucleocytoplasmic transport
    104898541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bvg03019]
    104898541
   03041 Spliceosome [BR:bvg03041]
    104898541
Messenger RNA biogenesis [BR:bvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     104898541
Spliceosome [BR:bvg03041]
 Complex C
  Other components
   EJC/TREX
    104898541
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104898541
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 eIF2A Nup160 PROPPIN IKI3
Other DBs
NCBI-GeneID: 104898541
NCBI-ProteinID: XP_010683937
LinkDB
Position
7:6288662..6305360
AA seq 319 aa
MADQKAEEATIPFKNLYSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHG
KVKDIEFKGHTDSVDQLCWDPKHGDVLATASGDKTVRLWDARSGKCSQQAELSGENINIT
YKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGDKFFLTTGNGTVEV
LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP
VRTISFNHTGEYIASASEDLFIDISNVETGRSIHQIPCRAAMNSVEWNPKSNLLAYAGDD
KNKYQADEGVFRIFGFQSA
NT seq 960 nt   +upstreamnt  +downstreamnt
atggcggatcagaaagcggaggaagcaacaattccattcaagaatctctacagcagagaa
tatcaaggtcacaagaagaaggtgcattcagtggcttggaattgcactggaacgaagctc
gcttcgggttcggtcgatcaaacggctcgagtttggcacattgaacctcatggtcatggc
aaggtgaaagatattgaatttaaggggcacactgatagcgtggatcagctctgttgggat
cccaagcatggagatgtacttgcaacagcatcaggggacaaaacagtgcgtttgtgggat
gctcgtagtgggaaatgctcacagcaagcagaacttagtggtgaaaatattaacattacg
tataaacctgacgggacacacatagctgtcggaaacagggatgatgaattaaccatattg
gatgttaggaaattcaagccaattcacaggcgcaaattcaactatgaggtaaatgagatt
gcctgggacatgacaggagataagttctttctgacaacaggaaatggtactgtcgaagtc
cttgcatacccatctttgaaggcacttgacacccttacggctcacactgctggttgctat
tgcattgcaattgatccactgggaagatattttgctgttggaagtgcggattcattggtc
agcctttgggatattaaagagatgctatgcgtacgaacttttgtaaaactcgagtggcca
gtccgaacaataagtttcaatcacactggagaatatattgcttcagctagtgaagattta
tttattgacatatcaaatgttgaaactggacggtctattcatcaaataccttgtcgggcg
gcaatgaatagtgttgaatggaatccaaaatccaatttgcttgcttatgctggagatgat
aaaaataaataccaagctgatgaaggtgtttttcgcatctttggtttccagagtgcctag

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