Beta vulgaris (sugar beet): 104898541
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Entry
104898541 CDS
T03548
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03013
Nucleocytoplasmic transport
bvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104898541
09122 Translation
03013 Nucleocytoplasmic transport
104898541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104898541
03041 Spliceosome [BR:
bvg03041
]
104898541
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104898541
Spliceosome [BR:
bvg03041
]
Complex C
Other components
EJC/TREX
104898541
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104898541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
Nup160
PROPPIN
IKI3
Motif
Other DBs
NCBI-GeneID:
104898541
NCBI-ProteinID:
XP_010683937
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All DBs
Position
7:6288662..6305360
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AA seq
319 aa
AA seq
DB search
MADQKAEEATIPFKNLYSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHG
KVKDIEFKGHTDSVDQLCWDPKHGDVLATASGDKTVRLWDARSGKCSQQAELSGENINIT
YKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGDKFFLTTGNGTVEV
LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP
VRTISFNHTGEYIASASEDLFIDISNVETGRSIHQIPCRAAMNSVEWNPKSNLLAYAGDD
KNKYQADEGVFRIFGFQSA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcagaaagcggaggaagcaacaattccattcaagaatctctacagcagagaa
tatcaaggtcacaagaagaaggtgcattcagtggcttggaattgcactggaacgaagctc
gcttcgggttcggtcgatcaaacggctcgagtttggcacattgaacctcatggtcatggc
aaggtgaaagatattgaatttaaggggcacactgatagcgtggatcagctctgttgggat
cccaagcatggagatgtacttgcaacagcatcaggggacaaaacagtgcgtttgtgggat
gctcgtagtgggaaatgctcacagcaagcagaacttagtggtgaaaatattaacattacg
tataaacctgacgggacacacatagctgtcggaaacagggatgatgaattaaccatattg
gatgttaggaaattcaagccaattcacaggcgcaaattcaactatgaggtaaatgagatt
gcctgggacatgacaggagataagttctttctgacaacaggaaatggtactgtcgaagtc
cttgcatacccatctttgaaggcacttgacacccttacggctcacactgctggttgctat
tgcattgcaattgatccactgggaagatattttgctgttggaagtgcggattcattggtc
agcctttgggatattaaagagatgctatgcgtacgaacttttgtaaaactcgagtggcca
gtccgaacaataagtttcaatcacactggagaatatattgcttcagctagtgaagattta
tttattgacatatcaaatgttgaaactggacggtctattcatcaaataccttgtcgggcg
gcaatgaatagtgttgaatggaatccaaaatccaatttgcttgcttatgctggagatgat
aaaaataaataccaagctgatgaaggtgtttttcgcatctttggtttccagagtgcctag
DBGET
integrated database retrieval system