Beta vulgaris (sugar beet): 104899888
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Entry
104899888 CDS
T03548
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104899888
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bvg01002
]
104899888
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bvg04121
]
104899888
Enzymes [BR:
bvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104899888
Peptidases and inhibitors [BR:
bvg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104899888
Ubiquitin system [BR:
bvg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104899888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
UCH_1
MATH
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
104899888
NCBI-ProteinID:
XP_010685483
LinkDB
All DBs
Position
7:complement(39002756..39017869)
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AA seq
1116 aa
AA seq
DB search
MTVMTPAPIDQEDDEMLVPHSDVADNHQPMEVVAQAEPANNSEAQPAEDPPLSRFTWKIE
MFTRLNAKKHYSEVFVVGGFKWRVLIFPKGNNVDYLSMYLDVADSPSLPYGWSRYAQFSL
AVVNQIHNKYSVRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVR
KIVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDIPSASI
PLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECVNVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEQYGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRD
NGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVK
RALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIMCNVDEKDIAEHL
RERLKREQEEKEHKKKEKAEAHLYTIIKVARDDDLMEQIGKDIYFDLVDHDKVKSFRIQK
QMPFNLFKEEVAKDFGIPVQFQRFWLWAKRQNHTYRPNRPLTPLEETQSVGQLREVSNKV
HNAELKLFLEVELGIDLRPIPPPDKTKDEILLFFKHYDPEKEELRYVGRLFVKANGKPGD
IVGKLKELSGYAAEDEIELYEEIKFEPTVMCEHIDRKLTFRGSQLEDGDIVCFQKALPAE
IAEKCRYPDVPSFLDYVHNRQVVHFRSLERPKEDDFCLELSRLHTYDDVVERVARQLGLE
DPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLK
TLKVAFHHATKDEVTIHTIRLPKQSTVGDVLNDLKTKVELSHPDAELRLLEVFYHKIYKI
FPPSEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKETAQNQMQIQNFGEPFF
LVIHEGETLSDVKVRVQKKLQVPDEEFSKWKFAFLSLGRPEYLQDTDVVSSRFQRRDVYG
AWEQYLGLEHADTAPKRTYTANQNRHTYEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatgactcccgctcctattgaccaagaagatgatgagatgcttgtcccacat
tctgatgtagccgacaatcatcagccaatggaagtcgttgcacaagctgaacctgctaat
aattccgaggctcaacctgcggaggatcctccattatccaggtttacgtggaaaatcgag
atgttcactcggttgaacgccaagaaacactattcggaagtgttcgtcgttggtggtttc
aaatggcgagtacttattttccccaaggggaacaatgtggattacctgtctatgtatctt
gatgttgccgattctccgagtttgccgtatgggtggagtaggtatgcacagttcagctta
gctgtggtcaatcaaattcacaacaagtattctgtgagaaaagatacgcagcatcagttt
aatgcccgggaaagtgattggggctttacatcttttatgcctttaagtgagttatatgac
cccagcagaggataccttgtaaatgatactgttcttgtggaggctgaggttgctgttcgt
aagattgtggactattggtcctatgattcgaaaaaggagactggatatgttggactgaag
aatcagggagccacatgctacatgaattctctactccagacactttttcacattccttat
ttcaggaaggctgtgtatcatatgcccacaactgagaatgatataccatctgcaagcatt
cctctggctctccagagtttattttacaagcttcaatacagtgacagcagcgttgcaaca
aaagaattgaccaaatcttttggatgggatacttatgactcattcatgcagcatgatgtg
caggagcttaatagggttctttgtgaaaagcttgaagacaaaatgaagggtaccgttgtt
gagggaactattcagcaattgtttgaagggcatcacatgaactatatcgaatgcgtaaat
gtggattacaaatctacaagaaaggaatccttttacgatcttcagcttgatgttaagggt
tgtcgtgatgtttatgcgtcttttgataaatatgtggaagttgaacggttggagggtgac
aacaagtatcatgctgaacagtatggtttacaggatgctaggaagggtgtcttatttatt
gattttcctccagttcttcaactgcagctcaaacgatttgaatatgattttatgcgtgat
accatggtgaagataaacgaccgttatgaatttcctcttcaacttgatcttgatcgtgat
aatgggaaatatttatctcctgatgctgacagaagtgtccgtaatctttacacgctccac
agtgttttggttcatagtggtggggtgcatggtggacattattatgcctttatacgacca
acactttccgatcaatggtacaaatttgatgatgaacgggttactaaggaagatgtgaag
agagcactggaggagcagtatggtggtgaagaagagttaccacagacaaatcctggtttc
aataatactcctttcaaattcacgaaatattcaaatgcgtatatgcttgtttacatacgg
gaaagtgacaaggataaaattatgtgtaatgtggatgagaaggacattgcagagcatctt
agggaacgtttgaagagagaacaagaagagaaagagcataagaagaaggaaaaggcagag
gcacacttatataccattataaaggttgcacgagatgacgacttgatggaacagatagga
aaagatatctattttgatctcgtagaccatgataaagtgaaatcttttcggattcagaag
cagatgccatttaatcttttcaaggaggaggttgccaaagattttggcatcccagtacaa
tttcagcgattttggctgtgggcgaagcgccaaaaccatacatatcgacctaatcggcca
ctaacacctctggaagaaacccaatctgttggacagctaagggaagtttccaataaagtt
cataacgcagaacttaagttattcttagaagtagagcttggaatagatttacgacctatt
ccacctccagataagacaaaggatgagattctgttatttttcaagcattatgatcctgag
aaagaagagctgcgttatgtgggaaggctttttgttaaggccaatggtaaacctggggat
attgtaggaaagttaaaggaattgtctggctatgctgctgaggatgaaattgagttatat
gaggaaatcaagtttgaaccaacagttatgtgtgaacatattgatcgaaaactcacattt
cggggtagtcagcttgaagatggggatatagtgtgtttccaaaaagcccttccagctgaa
attgcagaaaaatgccgttatccagatgttccttcattcttggactatgtgcacaatcgg
caagttgttcatttcagatcattggagagacccaaggaagatgatttttgcctagagttg
tcaagacttcatacttatgatgatgtggtggaaagagtggcacgccaacttggtttggag
gatccatcaaaaatcaggcttacttctcacaattgctattctcagcagccgaagccccag
cctattaagtaccgcggtgtggatcatttgtcggacatgctggtccactataaccaaact
tctgacatactatactatgaagttctggacataccattgccagaattgcaaggtttgaaa
acattgaaagttgctttccaccatgcgacaaaagatgaagtgaccattcacactattaga
ctgcctaaacagagtacagttggggatgttcttaatgatctgaagacaaaggtcgaattg
tcacatcctgatgctgagctgaggcttcttgaagtgttttatcacaagatctataagata
tttcctccaagtgaaaagattgagaacattaatgaccagtactggacattacgcgcagaa
gagattcctgaggaagagaagaacctgggtcctcatgatcgacttattcatgtgtaccat
ttcacaaaggagacggctcagaaccaaatgcaaatacaaaactttggcgagccgtttttt
ttggtgatccatgaaggagaaaccttatctgacgtcaaggtgagagtacaaaagaaattg
caggttccagatgaagagttttccaagtggaaatttgcattcctttccttaggtcgtcca
gaatacctccaggacactgatgttgtttctagtcgttttcagagaagagatgtttatggt
gcttgggaacagtaccttgggttagaacatgctgacacagctcctaaaaggacttacacg
gcaaatcagaatcgtcatacatatgagaagcctgtaaaaatctacaattag
DBGET
integrated database retrieval system
