Beta vulgaris (sugar beet): 104900717
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Entry
104900717 CDS
T03548
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03022
Basal transcription factors
bvg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104900717
09124 Replication and repair
03420 Nucleotide excision repair
104900717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvg03021
]
104900717
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104900717
Transcription machinery [BR:
bvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104900717
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104900717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
104900717
NCBI-ProteinID:
XP_010686514
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All DBs
Position
8:3264690..3272833
Genome browser
AA seq
450 aa
AA seq
DB search
MPEVRIIAKNFIDMVASLPAVKLDMLYANPFICEAILRSLPPLAKKYVLQMLYIDVPVPA
KSMEEWVLPAGLSKHRVAIDRLIQLRVLAETVDRKKETSYEMNKQIQINLQKQLIYGGVL
PREPMLSSAVRLPSLEELEIYALEQWECFLLHLISSNQAEKLTNVSSSMMKVFQRGLLSQ
REKEGSRLTEYGFQFLLMDTNAQLWYIIREYIANTEERGVDAATIISFLLELSFHETGQA
YNISTLNEVQKSIIKDLADLGLVKLQQGRKESWFIPTKLATTLSVSLSDTSTRKQGFVVV
ETNFRLYAYSTSKLHCEILRLFARIEYQLPNLIVAAINKESLHNAFENGITAEQIISFLQ
QNAHPRVAEKLPVVPENVTDQVRLWESDLNRVEMSPAQLYDEFPSKDMFESACDFAREYG
ALLWEDSKKMQLVVKTELHNDLREHLRRQK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagtgaggatcatagcgaagaatttcatagacatggttgcatcattgcctgct
gtcaagcttgatatgctctacgctaatcccttcatttgtgaagccattctcaggtccttg
ccacctttagcaaagaagtatgtgttgcagatgttgtacattgatgttccggtacctgcc
aagtccatggaagagtgggttcttccagctggactctccaaacatagagttgctattgat
cgattgattcagctgagggtgcttgctgaaactgttgacaggaaaaaggagaccagctat
gaaatgaataagcaaatccagattaaccttcagaagcagctaatatatggtggagtatta
ccgagggaaccaatgctttcaagtgctgtgaggctcccaagcttagaggaattagagatc
tatgctcttgaacagtgggagtgtttcctgctgcatcttatcagctccaaccaggcagaa
aagttaacgaatgtcagttcttctatgatgaaggttttccaacgtggcctcttgagtcaa
agggagaaagaaggttcaaggttaactgagtatggcttccagtttctgctgatggacaca
aatgcacagctatggtatatcatcagagaatatattgccaatactgaggaacgtggagta
gatgcagcaactataatatcctttctgctggagcttagttttcatgagacaggacaggca
tacaatatcagtacattgaatgaagttcagaaaagtataatcaaggaccttgcagatttg
ggattagtcaaacttcagcagggaaggaaggaaagttggttcattccgacaaagttagcc
accactctttcagtcagcttatcagatacatcaactaggaagcagggttttgtggttgtg
gagacaaactttcggttgtatgcttattctacgtctaaattacattgtgagattctgcgt
ctttttgcaaggatagaataccaacttccaaatctcattgtcgcggcaattaataaagaa
agcttgcataatgcgtttgaaaatggcattactgcagaacagataatttcatttcttcag
caaaatgcacatcctcgtgtagctgaaaaactgccagttgttccagaaaatgttacagac
caggttaggctttgggaatcagatttgaacagggtcgaaatgtcacctgctcagctttat
gatgaatttccgtcaaaggatatgtttgagtctgcttgcgactttgctcgtgaatatggt
gctctgctatgggaagattcaaaaaagatgcagctcgtagtaaaaactgagctacataat
gacttgcgagagcatctgcgacgccagaaataa
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