Blastochloris viridis: BVIR_126
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Entry
BVIR_126 CDS
T04109
Name
(GenBank) ECF RNA polymerase sigma factor SigH
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bvr
Blastochloris viridis
Brite
KEGG Orthology (KO) [BR:
bvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvr03021
]
BVIR_126
Transcription machinery [BR:
bvr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BVIR_126
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
GerE
Motif
Other DBs
NCBI-ProteinID:
ALK07943
LinkDB
All DBs
Position
complement(137289..137834)
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AA seq
181 aa
AA seq
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MMIEPSMRDALLAAVPSLRAFAISLSGNVDRADDLVQETLLRALSHIDSFQPGTNLNAWL
FTILRNLFHSEYRKRRREVEDADGVYAARLSTQPEQGARLDLEDFKAALTRLPPDQREVL
LLVGASGFSYEEAAEICQCAVGTIKSRVNRARTRLSQMLAVESVDDIGPDDKTRAALQAT
G
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgaaccgtccatgcgagacgcccttcttgccgcggtgccgagcttgcgcgca
ttcgccatttcgctgtccggaaacgtcgatcgggcggacgatcttgtgcaggagacactg
ctgcgggcgctctcgcacatcgacagcttccagcccggcaccaatctgaacgcctggctg
ttcaccatcttgcgcaacctgttccattccgaatatcgcaagcgccgacgcgaggtcgag
gacgccgacggcgtctacgccgcccgcctgtcgacccagccagaacagggtgcgcggctc
gaccttgaggacttcaaggctgcgctcacccgcctgccgccggaccagcgcgaagtgctg
ctgctggtcggcgcctccggcttctcctacgaagaggcggccgagatctgccaatgcgcg
gtcggcaccatcaagagccgcgtcaaccgcgcgcgcacgcggctgtcgcagatgcttgcg
gtcgagagcgtcgacgacatcggaccggacgacaagacccgtgccgcgctgcaggcgacc
ggctga
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