Blastochloris viridis: BVIR_2176
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Entry
BVIR_2176 CDS
T04109
Name
(GenBank) Integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
bvr
Blastochloris viridis
Brite
KEGG Orthology (KO) [BR:
bvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvr03032
]
BVIR_2176
03036 Chromosome and associated proteins [BR:
bvr03036
]
BVIR_2176
03400 DNA repair and recombination proteins [BR:
bvr03400
]
BVIR_2176
DNA replication proteins [BR:
bvr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BVIR_2176
Chromosome and associated proteins [BR:
bvr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BVIR_2176
DNA repair and recombination proteins [BR:
bvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BVIR_2176
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ALK09944
UniProt:
A0A0P0IVL3
LinkDB
All DBs
Position
complement(2409486..2409806)
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AA seq
106 aa
AA seq
DB search
MAGRTITRADLSEAVYQKVGLSRTESTALVELVLKEISDCLARGETVKLSSFGSFVVRHK
GQRVGRNPKTGVEVPIPPRQVMVFKPSNILKSRINGGTGNGVEDDE
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcggactatcacgcgtgcggatttgagcgaggcggtctaccagaaagtcggc
ctgtcgcggaccgaatcgacggcactggtggagttggtcctgaaggaaatttccgactgt
ctggcgcgcggcgagacggtgaagctgtcctcgttcggttccttcgtcgtccgccacaag
ggccagcgggtcggccgcaaccccaagaccggcgtcgaagtgccgattccgccgcgccag
gtgatggtgttcaagccctccaacatcctcaagagccgcatcaacggcggaaccggaaac
ggtgtcgaggacgacgagtga
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