Phocaeicola vulgatus: BVU_2218
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Entry
BVU_2218 CDS
T00546
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bvu
Phocaeicola vulgatus
Pathway
bvu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bvu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BVU_2218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvu03021
]
BVU_2218
Transcription machinery [BR:
bvu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BVU_2218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_30
GerE
DUF2089
Sigma70_ECF
HTH_28
BET
HTH_24
HTH_1
HTH_10
RWP-RK
Tn7_Tnp_TnsA_C
DUF134
HTH_40
Motif
Other DBs
NCBI-ProteinID:
ABR39878
UniProt:
A6L2G4
LinkDB
All DBs
Position
2864500..2865066
Genome browser
AA seq
188 aa
AA seq
DB search
MMINLKDNSEKDKYILELFQTSPKEAFRLLFDAYHMKLCIYAVQLTDSFEMAEDIVQDFF
IYFWEKKYYLKINQNLRYYLYLSVRNAAINALQKNNMLSMEELSGIDMGIPEESIDEEEQ
EERNKLLLEKLQKLPHQELQVVRAVIMENKKYKEAAEELHISVNTLKTHLTRALKQLRKE
YNLHSLFY
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgatgataaatttgaaagataatagcgaaaaggataagtatatcttggagttgttccag
acatctcctaaggaggcttttcgtttattatttgatgcttatcacatgaaattatgtata
tatgcggtgcagctgaccgattcttttgagatggctgaagatattgtgcaggatttcttt
atctatttttgggagaagaaatattatttgaaaataaatcagaatcttcgttattatctt
tatttgtctgtgcggaatgcggccatcaatgctttgcagaaaaacaacatgttgtctatg
gaagaactctcaggcattgatatgggtattcctgaagagtctatagatgaagaggagcaa
gaggaacgaaataagttattattggaaaaactacaaaaattacctcatcaggaattacaa
gtggtgagagctgtcattatggaaaataagaaatataaagaagctgctgaggaacttcat
atttctgtgaataccctaaaaactcatctgacaagagcattgaaacaattaagaaaagaa
tacaatctgcactcactgttttactaa
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integrated database retrieval system
