Brevundimonas vancanneytii: NCTC9239_01595
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Entry
NCTC9239_01595 CDS
T06708
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bvy
Brevundimonas vancanneytii
Pathway
bvy03030
DNA replication
bvy03430
Mismatch repair
bvy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC9239_01595 (holB)
03430 Mismatch repair
NCTC9239_01595 (holB)
03440 Homologous recombination
NCTC9239_01595 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvy03032
]
NCTC9239_01595 (holB)
03400 DNA repair and recombination proteins [BR:
bvy03400
]
NCTC9239_01595 (holB)
Enzymes [BR:
bvy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC9239_01595 (holB)
DNA replication proteins [BR:
bvy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC9239_01595 (holB)
DNA repair and recombination proteins [BR:
bvy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC9239_01595 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
VTO15017
UniProt:
A0A4P1K3M4
LinkDB
All DBs
Position
1:1552963..1553943
Genome browser
AA seq
326 aa
AA seq
DB search
MSEHPRDRFDLIADIQAEEAFLDALNRGRLHHAWLLCGVEGSGKASFAYRAARRLLGAAP
DPSRGPLGAAPHDPISRLVSAQAHPDLLVLERAVEGGKLKRAISVDQARDLPEFFAKSPS
QARHRVAIIDAADDLNINAANALLKILEEPPESGVLFLVTHAPGRLLATIRSRCRRLTFP
VWPEVRLADLVRQRTGVSEDEALAAAAMAGGSPGAALDLASGAMTEVDRLARAWVDGPEI
DRAEQLAIADGFRGPEGQARFEALMDRLIAAVKRRAVESGGREGARWAELWGRLSDLPDR
AIGLNLDKGDVLAGALADIARTKAAA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgagcatccgcgcgaccgcttcgacctgatcgccgacatccaggccgaggaagcc
tttctggacgcgctgaatcgaggacggctgcaccacgcctggctgttgtgcggggtcgag
ggatcaggcaaggccagcttcgcctatcgcgctgctcgtcgactactgggcgccgcgccg
gacccgtcgcgcgggccgctgggcgccgcgccgcatgaccctatcagccgcctggtgtcc
gcccaggcccacccggaccttctggtgctggagcgcgcagtcgagggcggcaagctgaag
cgcgccatctccgtcgatcaggcccgcgacctgccggaattcttcgccaagagcccgtct
caagcccggcaccgcgtcgccatcatcgatgcggcggacgatctgaatataaacgccgcc
aacgccttacttaaaattcttgaggaaccgcctgaaagcggcgtgctcttcctggtcacc
catgcgccgggccgtttgttggccaccatccgctctcgctgtcggcggctgaccttcccg
gtttggcctgaggtccgtctggccgatctggtgcgtcaacgcaccggcgtgtccgaagat
gaagccttggccgcagcagccatggctgggggctcgcccggcgcagctctggatctggcg
tcgggcgccatgaccgaggtcgaccgtctcgctcgcgcctgggttgatggaccagagatt
gatcgcgcggaacaactggccatcgccgacggcttccgcggcccggaagggcaggcgcgg
ttcgaggccctgatggatcgcctgatcgcagcggtgaaacgccgggccgtcgagtctggc
ggccgcgaaggcgcacgctgggccgagctttgggggcggctgtccgacctgcccgatcgc
gccatcgggctgaatcttgataagggagacgtcctggccggagccttggccgacatcgcc
cgcacgaaagccgccgcctga
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