Bacillus mycoides KBAB4: BcerKBAB4_5130
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Entry
BcerKBAB4_5130 CDS
T00642
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bwe
Bacillus mycoides KBAB4
Pathway
bwe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bwe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BcerKBAB4_5130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bwe03021
]
BcerKBAB4_5130
03019 Messenger RNA biogenesis [BR:
bwe03019
]
BcerKBAB4_5130
Transcription machinery [BR:
bwe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BcerKBAB4_5130
Messenger RNA biogenesis [BR:
bwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BcerKBAB4_5130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
ATPase_2
AAA
Spore_III_AA
AAA_22
NACHT
DUF6417
Motif
Other DBs
NCBI-ProteinID:
ABY46276
UniProt:
A9VSD0
LinkDB
All DBs
Position
complement(5093423..5094694)
Genome browser
AA seq
423 aa
AA seq
DB search
MNLSIAALENMKLKELYELAKEFKISYYSKLTKKELIFSILKARAEKEGFFFMEGVLEII
QSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLQVEAV
NGDDPDSAKERVHFPALTPLYPDRQMKLETETKKLPTRIMDLIAPVGFGQRGLIVAPPKA
GKTSLLKEIAHSVTTNHPEAELIVLLIDERPEEVTDIERSVKGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIRR
SGTRKEDLLIPKEHLDKLWGIRKTMRDTPDFVEGFLRKLRQTKTNEEFLQNIVADSKRYV
TTK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtcaattgcagcattagaaaacatgaaattaaaagagttatacgagcttgcg
aaggaatttaagatttcgtattacagcaagttaacgaaaaaagagctaatcttctctatc
ttaaaagctcgagcagaaaaagaaggtttctttttcatggaaggcgtattagaaattatt
caatcagaaggatttggattcttacgtcctatcaattattctccaagctcagaagatatt
tatatctcggcttcgcaaattcgtcgtttcgatttacgtaatggagataaggtttctggt
aaagtacgacctccgaaagaaaatgagcgctattttggattgctacaagttgaagctgta
aatggagatgatccagactcagcaaaagagcgtgtacatttccctgcattaacaccgtta
tacccagatcgccaaatgaaattggagacggaaacgaaaaagttaccgacacgcatcatg
gatttaatcgcaccagttggatttggacaacgtggtttaattgttgcgcctccaaaggct
ggtaaaacaagtctgttaaaagaaattgcacacagtgtcacaacaaatcatccggaagca
gaattaattgtacttttaattgatgagcgtccagaggaagtaacagatattgaacgttct
gttaaaggtgatgttgtaagttctacttttgatgaagtgccagagaatcatattaaagta
gcggagcttgtattagagcgtgcaatgcgtcttgtagaacataaaagggacgttgtcatt
ttaatggatagtattacccgtttagcgcgtgcttacaaccttgttattccgccaagtggt
agaaccttatcgggtggtattgatcctgctgcttttcatagaccgaagcgtttctttggg
gctgcgcgtaatatcgaagagggcggtagcctaacgattttagcaacagcgcttgttgat
acagggtctcgtatggatgatgtaatttacgaggagtttaaaggaactggaaatatggaa
cttcacttagatcgctcattagctgagcgccgtatcttcccagcgattgatattcgtcgc
tctggtacgcgtaaagaagacctattaattccgaaagaacatttagacaagctgtggggt
attcgtaaaacaatgcgtgatacaccagactttgttgaaggcttcttacgtaaacttcgt
caaacaaagacaaatgaagaatttttacaaaacattgttgcagactcaaaaaggtatgta
accactaagtaa
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