Paraburkholderia xenovorans LB400: DR64_2866
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Entry
DR64_2866 CDS
T03290
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb00550
Peptidoglycan biosynthesis
bxb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DR64_2866 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bxb01002
]
DR64_2866 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bxb01011
]
DR64_2866 (dacB)
Enzymes [BR:
bxb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DR64_2866 (dacB)
Peptidases and inhibitors [BR:
bxb01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
DR64_2866 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
bxb01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
DR64_2866 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AIP33352
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All DBs
Position
1:complement(3129773..3131497)
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AA seq
574 aa
AA seq
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MTHAFLTSLARRVFHAARRPGFPSASDTPNVSTPRLPHLPHLPHLPHLPRLPRRFAPRAS
GWLLACVALGCGASLPLAAQARVKATHPSVNVTTVLPPSVMAGLQRAHVPLTSISVVVEK
VGDRTPIVALNAGKPMMPASTMKLVTTYSGLSILGPEYRWRTSAYADGTLDANGVLHGNL
YIQGTGDPKLVPEELIDLVQKIHKTGINGIDGALVLDKRYFDPSTRDLPPFDDDATAPYN
VGPDPLLYAFKSLSFTLTPSPDGSVAIDVLPALAQLQIDNQMHAVNGPCRGDAASVSPTV
TPQPNGTVVASFDGDYSVRCGPRTINVAVLDHSAFFAGGFLALWQQTGGTFSGATREGAV
PVGAKLVATHQGPMLSDIVRDINKFSNNTMARNLFLTIGATEEKGPATPAKSARAIEAFL
RRDSINMEYLTLDNGSGLSRDEHITALALADLLQRANASPVAQVFVESLPIAGVDGTMRN
RLTNQGAGGNAHIKTGTLRDVRAIAGYVASADGNSYVVVSLINDPHSEAARAAHDALLEW
VYQGPSQGFTKVSDPVVEPRSSKPRKNPHQRGAH
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgcttttctgacctctctcgcacgtcgcgtattccatgccgcgcgccgtccg
ggtttcccgtctgcttccgacacgcccaacgtttccacgcctcgcctgcctcacttgcct
cacttgcctcacttgcctcacttgccgcgcctgcctcgccggttcgcgccgcgcgcgagc
ggctggctgctcgcctgcgtcgcgctgggctgcggcgcatcgctgccgctcgccgcgcag
gctcgcgtcaaggccacgcatccgagcgtcaacgtcacgacggtcttgccgccgtcggtg
atggccggcttgcagcgcgcacacgtgccgttgacgtcgatcagcgtggtcgtggagaaa
gtcggcgaccgcacgccgatcgtcgccctgaacgccggcaagccgatgatgcccgcctcg
accatgaagctcgtcaccacgtactcaggcctgtcgatactcggccccgagtaccgctgg
cgcaccagcgcctatgcggacggcacgctcgacgccaacggcgtgctgcacggcaatctc
tacattcagggcacgggagaccccaagctcgtgcccgaagaactgatcgacctcgtgcag
aagatccacaagacgggcatcaacggcatcgacggcgcgctggtgctcgacaagcgctac
ttcgatccgtccacacgcgacctgccgccgttcgacgacgacgccaccgcgccgtacaac
gtcggccccgatccgctgctctatgcgttcaaatcgctgtccttcacgctgacgccgtcg
cccgacggcagcgtggcgatcgacgtgctgcccgcgctcgcgcagctgcagatcgacaac
cagatgcacgctgtcaacggcccatgccgcggcgacgcggcctccgtgtcgcccaccgtc
acgccgcagccgaacggcactgtcgtagcctcgttcgacggcgactattcggtgcgctgc
ggcccgcgcacgatcaacgtcgcggtgctcgatcattcggcgtttttcgcgggcggtttt
ctcgcgctgtggcagcagaccggcggcacgttcagcggcgcgacgcgcgaaggcgccgta
ccggtgggcgccaaactggtggcgacacaccaggggccgatgctgtccgacatcgttcgc
gacatcaacaagttcagcaacaacacaatggcgcgcaacctgttcctgacgatcggcgcc
accgaggaaaagggacccgccacgcctgccaaatcggcgcgcgcgatcgaagcgtttctg
cgccgcgacagcatcaacatggaatatctgacgctcgacaacggctcgggcctttcgcgc
gacgagcacatcaccgcgctcgcgctcgccgatctgctgcagcgggccaacgcgagtccg
gtcgcgcaggtgttcgtggagtcgctgccgatcgcgggggtcgacggcaccatgcgcaac
cggctgaccaaccagggcgcgggcggcaacgcgcacatcaagacaggcaccttgcgcgac
gtgcgggcaatcgcgggctatgtggcctcggcggacggcaatagttacgtggtcgtcagc
ctgatcaacgatccgcattcagaagccgcacgcgccgcgcacgatgcgctgctcgaatgg
gtgtaccagggtccgtcgcaaggctttaccaaagtctccgatccggtcgtcgaaccgcgt
agcagcaagcccaggaaaaacccgcatcagcgcggcgctcactga
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