Bacteroides xylanisolvens: BXY_04260
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Entry
BXY_04260 CDS
T02579
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bxy
Bacteroides xylanisolvens
Pathway
bxy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bxy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BXY_04260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bxy03021
]
BXY_04260
Transcription machinery [BR:
bxy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BXY_04260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_24
HTH_38
GerE
MarR
MarR_2
HTH_AsnC-type
HTH_11
Motif
Other DBs
NCBI-ProteinID:
CBK65683
UniProt:
D6D6N8
LinkDB
All DBs
Position
514910..515461
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AA seq
183 aa
AA seq
DB search
MSNNIDIKTLEAFQDGNHKAFETIFIAYYNKTKTFIDGYIKSEPDAEELTEDLFVNLWIN
RHSIDTSKSFNSYLHTIARNAAINFLKHKYVCDAYLNNNQDTEYSSTSEEDLIAKELEML
IDKLVGGMPEQRRMIYTLSRNEGLSNAEIAERLNTTKRNVESQLSLALKEIRKVISCFLV
SLL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataacattgatataaaaacgctggaggcctttcaggatgggaatcacaaggcc
tttgagactatttttatagcatactacaacaaaaccaaaacattcattgacggatatata
aaatcggagcccgatgcagaagagctgacagaggatttatttgtcaatctttggatcaat
cgtcattccattgatacatccaaatcattcaattcttatttgcacaccattgccagaaat
gcagccatcaacttcctgaaacataaatatgtgtgcgatgcctatctgaacaacaaccaa
gatacagaatatagctctacttccgaagaagaccttattgccaaggaactggaaatgctg
attgacaaacttgtcggaggaatgcccgaacaacggagaatgatttatacattgagccgt
aacgaaggattatccaatgccgaaattgccgaacgcctgaatactaccaaaagaaatgtt
gaaagccagttaagccttgctttgaaagaaatacggaaggttatttcatgttttttggta
tcattgttatag
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integrated database retrieval system
