Bacteroides xylanisolvens: BXY_17010
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Entry
BXY_17010 CDS
T02579
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
bxy
Bacteroides xylanisolvens
Pathway
bxy02020
Two-component system
bxy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bxy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BXY_17010
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BXY_17010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bxy03021
]
BXY_17010
Transcription machinery [BR:
bxy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BXY_17010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
LacI
Motif
Other DBs
NCBI-ProteinID:
CBK66808
UniProt:
D6CXA6
LinkDB
All DBs
Position
2004062..2005546
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AA seq
494 aa
AA seq
DB search
MAQGSRQIQSQAQQQVQTLSPQQILVVKLLELPAVELEDRIHAELLENPALEEGKEENAA
DEYADSDTTEDGMDSDANDYDSLSDYLTEDDIPDYKLQENNRSKDEQAEDIPFSDSTSFY
EILKEQLRERNLTEHQCDLVEYLIGSLDDDGLLRKSLESICDELAIYAGIESTEEELEEA
LCILQDFDPAGIGARSLQECLLIQICRKKDEEKKPNPILELEERIIRECYEEFTRKHWEK
IIKKLDIDEETFQEALNEITKLNPRPGASLGEAIGRNLQQIVPDFIVETYDDGTINISLN
NRNVPELRMSRDFTEMVEEHTKNRANQSKESKEAMMFLKQKMDAAQGFIDAVRQRQNTLM
TTMQAIIDLQRPFFLEGDESLLKPMILKDVAERTGLDISTISRVSNSKYVQTNYGIYPLK
FFFSDGYTTEDGEEMSVREIRKILKECIDGEDKKKPLTDDELADILKEKGYPIARRTVAK
YRQQLNIPVARLRK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaggttcccgtcaaatacaatctcaggcgcaacagcaggtacaaacgctctcg
ccccagcagattctggtcgtgaaactgttggagcttcccgcagtagagctggaagaccgt
atccatgctgaactgcttgaaaatccggcacttgaagaaggtaaagaagaaaacgctgcg
gatgagtatgctgattccgacactacggaagatggcatggatagtgatgccaacgattat
gattctttgagtgattatctgactgaagacgatattcccgattataaattacaagaaaac
aaccgttcgaaagacgaacaggcggaggatattccgttctccgattccacctctttttat
gaaatcctgaaagaacagttgcgtgaacgcaacctgactgaacatcagtgtgacctggtg
gagtatctgatcggttcattggacgatgacggactgctccgtaagtcattggagagcatc
tgtgatgaactggcgatttatgccggcatcgaatcgacagaagaagaattggaagaagca
ctctgtatcttgcaggactttgatcccgctggtatcggtgcccgcagccttcaagaatgt
ttgttgatacagatttgccggaagaaggatgaagagaagaagcccaacccgatactggag
ctggaagaacgtatcatcagagagtgttatgaagaattcacccgtaaacactgggagaag
attataaagaaactggacattgatgaagagactttccaggaagctcttaatgagataacc
aagctgaatccccgtccgggtgcttctttgggagaagcgatcggcaggaatctccaacag
atagttcccgactttatcgtggaaacgtatgatgacggaaccatcaatataagcctcaat
aaccgtaatgtccccgaactccgtatgagtcgcgacttcacggaaatggtggaagagcat
accaaaaacagggctaatcaatcaaaagaatccaaagaagcgatgatgttcctgaagcag
aaaatggatgcggcacaaggatttatcgatgctgtgcggcagcgtcagaataccctgatg
actaccatgcaggctatcattgacttacaacgtccttttttcttggaaggagacgaatct
ctgctgaaaccgatgattttaaaagatgtggccgaacgtaccggactggacatttcaacg
atctcccgcgtgagcaacagtaaatatgtgcagacaaattatggcatctatccgctcaaa
ttctttttcagcgacgggtataccacagaggacggcgaagaaatgtctgtccgcgagata
cgcaagattctgaaagagtgtattgatggggaggacaagaagaaaccgctgacagatgat
gaattggcggacatcttgaaagagaaaggttatcccattgctcgtagaacggtagccaaa
taccgtcagcagttgaatattccggttgcgcgacttcgaaaatga
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