Bacteroides xylanisolvens: BXY_31170
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Entry
BXY_31170 CDS
T02579
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bxy
Bacteroides xylanisolvens
Pathway
bxy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bxy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BXY_31170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bxy03021
]
BXY_31170
Transcription machinery [BR:
bxy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BXY_31170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_40
HTH_23
DUF1492
HTH_10
UPF0122
HTH_24
HTH_17
Motif
Other DBs
NCBI-ProteinID:
CBK68127
UniProt:
D6D125
LinkDB
All DBs
Position
complement(3870634..3871191)
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AA seq
185 aa
AA seq
DB search
MNENFDITYKALFRRYYPSLIFYATRLVGEEEAEDVVQDVFVELWKRKDHIEIGDQIQAF
LYRAVYTRALNVLKHRSVEEGYCVAMEEINQRRAEFYQPDNNEVIRRIEDKELRKEIHDA
INELPDKCKEVFKLSYLHDMKNKEIADILGVSLRTVEAHMYKALKYLRGRLDPLWTILFL
FLWRL
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaacttcgatataacctataaagcactatttcgccggtactaccccagcctg
attttctatgctacccgtctggtgggagaagaagaagcagaggatgtagtgcaggacgta
tttgtagaattatggaagcggaaagaccacatagagataggcgaccaaatccaggccttt
ctctatcgtgccgtttacacccgtgcccttaacgtcttgaaacaccgcagtgtggaagaa
ggttattgtgttgccatggaagaaatcaaccaaagacgcgcagaattctatcaaccggac
aacaacgaagtgattcggaggatcgaagacaaggaactccgcaaggaaattcatgatgca
attaatgaactccctgacaaatgcaaagaggttttcaaacttagctatctgcatgatatg
aaaaacaaggaaatagccgatattctcggagtttcactccgcacggtggaagcccatatg
tataaggctttaaaatacttgcgtggccgacttgatcctctttggacgattcttttctta
tttttatggcgattataa
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integrated database retrieval system
