Burkholderia sp. YI23: BYI23_A008250
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Entry
BYI23_A008250 CDS
T01711
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
byi
Burkholderia sp. YI23
Pathway
byi03030
DNA replication
byi03430
Mismatch repair
byi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BYI23_A008250
03430 Mismatch repair
BYI23_A008250
03440 Homologous recombination
BYI23_A008250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
byi03032
]
BYI23_A008250
03400 DNA repair and recombination proteins [BR:
byi03400
]
BYI23_A008250
Enzymes [BR:
byi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BYI23_A008250
DNA replication proteins [BR:
byi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BYI23_A008250
DNA repair and recombination proteins [BR:
byi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BYI23_A008250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AET88663
LinkDB
All DBs
Position
1:920836..924363
Genome browser
AA seq
1175 aa
AA seq
DB search
MYNTAMSDPRFVHLRVHSEFSIADGIVRLDDVVKAAAQDGQGALALTDLGNAFGLVRFYK
EARGKGVKPIAGCDVWITNPDDRDKPSRLLLLVRDKQGYLNLCELLSRAWLTNQYRGRAE
VMLEWLEGGLAQGLLALSGAQTGDIGMAFAAGNAASAQRHAERWAKLFPNAFYIELQRAG
QPGEQGYIQEAVALAAKLRLPVVATHPMQFMTPDDFTAHEARVCISEGDILANPRRQKRF
TQDQFFRTQDEMCALFADIPSALANTVEIARRCNLTLELGKPKLPLFPTPDGMSLDDYLV
QLSKEGLEVRLQQLYPDETEREAQRETYYARLDFECGTIIKMGFPGYFLIVADFIMWAKN
NGVPVGPGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDR
VIQYVKGKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTI
ADAMKEEPTLQERFDSEDEVHQLLELAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQ
GEDGGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKQDWNLAQVPLDD
PVSFQILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARK
HGREIVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEM
AQHREIFAQGAAVNGLTRAKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPA
EFMAANMSLAMDDTDKVKILFEDCATNGMKVLPPDINQSAYRFEPVAEADGTRSKTIRYG
LGAVKGSGQNAIEEILRAREDGPFVDLFDFCERIDRRVVNRRTVEALIRSGAFDTLHANR
AQLLASVPLAMEAADQAAANAMQAGLFDMGDATLAKHEYVDEPMWSDKKRLQEEKTALGF
YLSGHLFDAYKGEVRRFVRQKIGELKEGRDKLVAGVISAMRTQMTQRGKMLIVNLDDGSG
QCEVTVFNEQFEANKALFKEDELLVVQGQARNDAFTGGIRFTVDTAMDLERARSRYAQSV
KVEMNGNADALRLRRVLEAHAAGAQSEPPPMPVKENGRQRSSAPIPNGLNVSIVYRSEHA
EGEVRLGDAWRVKPTDELITALRGEFAGSAIEIVY
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtacaataccgccatgtcagatccccgcttcgttcatctccgcgtccactccgaattc
tcgatcgccgacggcatcgtacggctggacgatgtcgtcaaggctgccgcacaagacgga
caaggcgcgctcgcgctgaccgatctcggcaacgcattcggtctcgtgcgcttttacaag
gaagcgcgcggcaagggtgtgaagcccatcgccggctgcgacgtctggatcaccaatccc
gacgaccgcgacaagccctcgcgcctgcttttgctcgtgcgcgacaagcagggctatctc
aacctgtgcgaactgctgagccgcgcgtggctgacgaatcaatatcgcggtcgcgccgag
gtcatgctggagtggctcgaaggcggcctggcgcaaggcctgctcgcgctgtccggcgcg
cagacgggcgatatcggcatggcgttcgcggcgggcaatgcggcgagcgcgcaacgtcac
gccgagcgctgggcgaagctctttcccaatgcgttctatatcgaactgcagcgcgcggga
cagccgggcgagcagggctatattcaggaagccgtcgcgctggccgcgaagctgcgcttg
ccggtcgtcgcgacgcatccgatgcagttcatgacccccgacgatttcaccgcgcacgaa
gcgcgcgtgtgcatttcggaaggcgatatcctcgcgaatccgcgccggcagaagcgcttc
acgcaagatcagtttttccgcacgcaggacgaaatgtgcgcgctcttcgcggatattcct
tctgcgctcgcgaacacggtggagatcgccaggcgctgcaatctgacgctcgaactcggc
aagccgaagctgccgctcttcccgacgcccgatggcatgtcgctcgacgactatctcgtg
caactgtcgaaggaagggctcgaagtccgcctgcagcagctttatcccgatgaaaccgaa
cgcgaggcgcagcgcgaaacgtattacgcgcgcctcgatttcgagtgcggcacgatcatc
aagatgggctttccgggctacttcctgatcgtcgccgacttcatcatgtgggcgaagaac
aatggcgtgccggtcggtccgggccgcggttcgggcgcgggttcgctcgtcgcctatgcg
ctcggcatcaccgatctcgacccgttgcgctacaacctgctgttcgagcgcttcctgaat
ccggaacgcgtgtcgatgcccgacttcgacatcgacttctgccaggaagggcgcgaccgc
gtcattcagtacgtgaagggcaagtacggcgcggacgcggtgtcgcagatcgcgacgttc
ggcacgatggcggcgaaggccgcggtgcgcgacatcggccgcgtgctcgatctcggctac
atgttcaccgatggcatcgcgaagctgattccgttcaagccgggcaagcacgtgactatc
gcggacgcgatgaaggaagagcccacgctgcaggagcgcttcgattccgaagacgaagtg
catcagttgctcgaactcgcgcagcgcgtcgaagggctcacgcgcaacgtcggcatgcac
gcgggcggcgttctgatcgcgccgggcaagctcacggacttttgtccgctctacacgcag
ggcgaagacggcggcgtcgtcagtcagtacgacaaggacgacgtcgaagccgtcggcctc
gtgaagttcgactttctgggcctcaccacgctcaccattctcgactgggccgagcgttac
atccggcgtctcgatccgtcgaagcaagactggaatctcgcgcaagtgccgctcgacgat
ccggtctcgttccagatactgaagaaagcgaacaccgtcgccgtgttccagctggaaagc
cgcggcatgcagggcatgctgaaggacgcgcagccggaccgcttcgaggacatcatcgcg
ctcgtggcgctgtatcgcccgggcccgatggacctgattccgagcttctgcgcgcgcaag
cacgggcgcgagatcgtcgagtatccggacccgcgcgtcgaacctgttctgaaagagacc
tacggcatcatggtctatcaggagcaggtgatgcagatggcgcagatcatcggcggctat
tcgctcggcggcgcggacttgctgcgccgcgcgatgggcaagaaaaagcccgaggaaatg
gcgcagcaccgcgagatcttcgctcagggcgcggcagttaacggcctgacgcgcgcgaaa
tccgacgaaatcttcgacctgatggagaagttcgccggctacggcttcaacaagtcgcac
gcggcggcctacgcgctgctcgcgtattacacggcgtggctgaaggcgcatcatccggcc
gaattcatggcggccaacatgtcgctcgccatggacgacaccgacaaggtgaaaatcctt
ttcgaggattgcgcgaccaacggcatgaaggtgctgccgccggatatcaatcagtcggcg
tatcgcttcgagccggtcgcggaggccgacggcacgcgctcgaagaccatccgctacggc
ctgggcgcggtgaagggcagtggccagaacgcgatcgaggaaatcctgcgcgcgcgcgaa
gacggcccgttcgtcgatctgttcgatttctgcgagcgcatcgaccggcgtgtcgtgaat
cgccgcaccgtcgaggcgctgattcgctcgggcgcgttcgacacgctgcatgcgaatcgc
gcgcaactgcttgcctccgtgccgctcgcgatggaagccgccgaccaggccgccgccaac
gccatgcaggccggccttttcgacatgggcgacgccacgctcgcgaagcacgaatacgtc
gacgaaccgatgtggtcggacaagaagcgcctgcaggaagaaaagaccgcgctcggcttc
tatctgtcggggcatcttttcgatgcctacaagggcgaggtgcgccgtttcgtgcgccag
aaaatcggcgagctgaaggaagggcgcgacaagctggtcgcgggcgtcatctccgcgatg
cgcacgcagatgacccagcgcggcaagatgctgatcgtcaatctcgacgatggcagcggc
cagtgcgaagtcaccgtcttcaacgagcagttcgaagcgaacaaggcgctcttcaaggaa
gacgagctgctcgtcgtgcaggggcaggcgcgcaacgatgcgttcacgggcggcatccgc
ttcaccgtcgatacggcgatggatctcgaacgcgcgcgcagccgttatgcgcagtccgtg
aaagtcgaaatgaacggcaacgccgatgcgctgcgtttgcgccgcgtgctcgaagcgcat
gccgcgggcgcgcagagcgaaccgccgccgatgccggtcaaggaaaacggccgtcaacgt
tcgagcgcgccgattccgaacgggctgaacgtcagcatcgtctatcgcagcgaacatgcg
gagggcgaggtgcgtctcggcgatgcgtggcgcgtcaagcccaccgacgaactcatcacg
gcgctgcgcggcgagttcgcgggcagcgcgatcgagatcgtgtattga
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