Bipolaris zeicola: COCCADRAFT_94586
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Entry
COCCADRAFT_94586 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
bze
Bipolaris zeicola
Pathway
bze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCCADRAFT_94586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bze03041
]
COCCADRAFT_94586
Enzymes [BR:
bze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
COCCADRAFT_94586
Spliceosome [BR:
bze03041
]
Complex A
U2 snRNP components
U2 related factors
COCCADRAFT_94586
Complex B
COCCADRAFT_94586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
OLD-like_TOPRIM
Motif
Other DBs
NCBI-GeneID:
19153781
NCBI-ProteinID:
XP_007711690
JGI:
94586
UniProt:
W6YEP5
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
IPSSSPPPNSSSESLGSGAGRVTTFLLRGFTGIFNTTDLRWRRATLIPQDAPPRDDRKKD
PETQAKDKLAERAAKLAEWKKRNAERLTKEKTDTQGSGASPAGTAPATPSAAAATPPPQT
PASEVKLDTAKTKVPQKSVTEKLKQKQPEKSTFKLDASAAARPLDMAKPAGKTVTAASTK
GNGNIGSFGLKTKTAAEAEAETSRKAFLDEEGPTRKRKFQALPEFTANDEPEPEADGAED
DDAAMSGIGSDDEENNAELQARLEKRRADIANENNQDATMEEAPAVQVPAADKMDVDETV
GAEEDEIDPLDAFMADLTEPQPSRGVPSGQAMFADELEPVETSVEAQDLLELRAAKKKKK
EVATVDHDKVEYEPFRKSFYTEPLEVSQMTPEEVADLRHELDGIKVKPDDVPRPVTKWAQ
MGLLQATMDVFTRVGYLKPTSIQAQAAPISLSGRDLIGVAKTGSGKTLAFGIPMIRHILD
QRPLKPSDGPIGLILAPTRELSLQIVHELKPFLSASGITIKCAYGGQPISDQIAMIKRGG
IHILCGTPGRLIDLMTANQGRVLSFRRITYVVLDEADRMFDMGFEPQVMKILANVRPDRQ
TVLFSATMPKNMVALARKALNNPAEVTIGGRSKVAPEITQIISIVPNSYEKKINKLLLHL
GQLFSEDENAQVLIFTERQETAEDLLSKLYKAKYFSVNTIHGAKDQTDRNEAISDFKQGV
LSILIATSVAARGLDVPGLALVLNFDCPTHLEDYVHRCGRTGRAGNKGTAITLIENPGQE
RFAIHVVKALKESGAEVPEKLQEMADTFHEKAKAGTEKYYGGFGGKGLDRLDATRALEKK
REKRQLKLEGIEDSDEEEEILPIVKKPEVTGPGAVKAAEGTTPAAEVEDQPHWMKLLNSK
IVVNKTERPEAAATGKPMSARERAMAAASKVDGRLSKKGMIHAGQPIDNKGPDAGLYHST
IEINDFPQKARWAVTNRTNVAKILDQTGVSITTKGNFYPPGKQPGENDLPKLYILVEGDT
ENIVTQAMMELTRLLREGTIAAEDASTTRTATGRYSVV
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
ataccctcaagcagtccgccacctaattcgtcttctgaatcgctgggctcaggcgccggg
cgagtgacgacctttctcttgcgcggattcacaggcatttttaataccaccgacttaaga
tggcgacgcgccacgctgattcctcaagatgctcccccgcgcgacgacaggaagaaggac
cccgagacacaagccaaggacaagctcgctgaacgcgcggcaaagctggccgaatggaag
aagcgcaatgctgagcgtcttaccaaagaaaagacagacacacagggctctggtgcctcg
ccggctggcactgcgcctgcaaccccctccgctgctgctgcgacgccgcctccccagacc
ccagcaagtgaggtcaagcttgacaccgctaagactaaagttccgcagaagagcgttact
gagaaactcaaacagaagcagcccgagaagtcgaccttcaaactggatgcttctgctgct
gcccgccccttggacatggccaagcctgctggcaagacagtgacagccgctagcacaaag
ggcaacggcaacattggctctttcggtctcaagactaagacagctgcagaagccgaggct
gaaacttcgagaaaagccttcctcgacgaagaaggcccaacgcgcaagcgcaagtttcaa
gccctccccgaatttactgcgaacgacgaacctgaacccgaagctgacggtgccgaagac
gatgacgctgcaatgagtggcattggaagtgatgacgaagagaacaatgcggaactccag
gctcgcctcgagaagcgtcgcgcggatatcgccaacgaaaacaaccaagacgctaccatg
gaagaagcacctgccgtccaagtccccgccgccgacaaaatggacgttgacgaaactgta
ggggccgaagaagacgaaatcgatcctctcgatgccttcatggccgacttgaccgaacca
caacccagccgcggtgtaccttcgggccaggccatgttcgccgacgagctcgaacctgtc
gagacctctgttgaggcgcaagatcttctcgaacttcgtgctgccaagaaaaagaagaag
gaggttgccactgtcgaccacgataaagttgagtacgagccgttccgaaaatctttttac
actgagccgctcgaggtttctcagatgacgccagaagaagttgccgatctccgtcatgag
cttgacggcatcaaagtgaagccagatgatgtgcctcgtcccgtcactaagtgggcccag
atgggcttgctgcaagcaaccatggacgtcttcactcgcgtaggctacctgaagcccaca
tctatccaggcacaagctgctcctatttctctttctggacgtgacctcatcggtgtcgca
aaaactggttctggaaagacactcgcgttcggtataccaatgattcgtcatattcttgat
caacgcccactaaagccgtctgacggtcccattggactgatccttgctcccactcgagag
ttgtcattgcagattgtccatgagctcaaaccgttcctctcagcttctggcataactatc
aaatgcgcttacggtggacagcccatctccgaccagattgctatgattaagcgtggtggc
atacacattctctgtggaacacccggtcgcctgatcgatttgatgactgcaaaccagggg
cgtgtgctctccttccgccgcattacctatgttgttcttgatgaggctgatcgcatgttc
gacatgggttttgaaccacaagtcatgaagattcttgcaaatgtgcgccccgaccgtcaa
actgtgctattttcagcaaccatgccaaagaacatggttgcattggcccgtaaagccctg
aacaatccagcagaagtgacaattggtggtagatccaaagtggcccctgagattacccag
atcatatccattgttcctaatagttatgagaagaagatcaacaagttgctcttgcatctt
ggtcagctcttctctgaggacgaaaatgcacaagtattgattttcacggagcggcaggaa
actgcggaagatttattgtccaagctctacaaggccaagtatttctctgttaacacaatt
cacggagctaaagatcagactgatcgaaacgaagcgatcagtgatttcaagcagggtgtt
ctttctattctcattgccacgtctgtagcagcacgtggtcttgacgtccccggtctggca
ctcgtcttgaactttgactgcccaactcacttggaagattacgttcataggtgcggtcgt
actggtcgtgcgggtaacaagggtactgccattactcttattgagaaccccggtcaagag
cgcttcgctatccatgttgtcaaagcactaaaggagagcggagcagaagtccctgaaaag
cttcaagaaatggcagataccttccatgagaaggccaaggcaggtaccgaaaaatactat
ggcggcttcggtggcaaaggtctcgatcgacttgatgcaactcgtgctcttgagaagaag
cgcgagaagcgtcagcttaagctggaaggtattgaagacagcgatgaagaagaagagatt
ctgccaattgttaagaaacccgaggttactggtcctggcgctgtcaaggctgctgaagga
actacacctgctgctgaagtcgaggatcaacctcactggatgaagctactcaacagcaag
attgttgtcaataagaccgagcgccccgaggctgctgcgactggcaagccgatgagtgca
agggagcgggcgatggccgctgcctccaaggtcgacggtaggctcagcaagaagggcatg
atccacgcgggccagcccatcgacaacaagggtcctgacgctggtctctaccattcaact
attgagatcaacgacttcccccagaaagctcgatgggccgtcaccaatcgaaccaatgtc
gccaagattctcgatcagactggtgtctcgattacgacaaagggtaacttttacccacct
ggcaagcagcctggtgagaatgatcttcccaagctgtacatcctggttgagggagatacg
gagaatattgtcacacaggctatgatggaactcacccgcctcctgcgcgaaggtacaatt
gcggcagaagatgcatctacgactcgtaccgccactggtcgatatagcgttgtttga
DBGET
integrated database retrieval system
