Bacteroides zoogleoformans: C4H11_02425
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Entry
C4H11_02425 CDS
T05371
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bzg
Bacteroides zoogleoformans
Pathway
bzg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bzg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4H11_02425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bzg03021
]
C4H11_02425
Transcription machinery [BR:
bzg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C4H11_02425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_24
Sigma70_r4
HTH_11
GerE
HTH_30
HTH_7
HTH_20
MarR_2
HTH_23
HTH_Mga
HTH_10
HTH_AsnC-type
Sigma70_ECF
MarR
Fe_dep_repress
HTH_28
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AVM51961
UniProt:
A0A562V6Q8
LinkDB
All DBs
Position
complement(559009..559590)
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AA seq
193 aa
AA seq
DB search
MLLNINDNKGLIIALQTDKEVAFDFVYRAYFPRLCAFCSQYLNEQEDIEEVVQETMLWLW
ENTSTLMVDLSLKTLLFVIVKNKALNRISHYEIKRKVYQEIAEKYKTKFESPDFYMTDEL
FKAYEQAVKNLPKEFREVYLLTRSKKITRKEIASRLNVSSQTVNYRVGQALKLLRMALKK
FLPSLLAVVLWGL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgctattgaatatcaatgacaataagggtttgattattgctttgcaaaccgataaagaa
gttgcattcgattttgtttatagagcctactttccgagactttgtgctttctgctcacaa
tatctcaatgagcaagaggatatagaagaggtggtacaagaaactatgctgtggctttgg
gagaacacttctacgctgatggttgatttaagcttaaaaactctgctttttgtcatagtc
aaaaacaaggcgctgaatcgtataagccattatgaaatcaaacggaaagtatatcaagag
attgcggaaaaatataaaacaaagtttgagtcacctgatttttatatgactgatgagtta
ttcaaagcctatgaacaagccgtaaaaaatttaccgaaagagtttcgggaagtttatcta
ctgaccaggagcaaaaaaatcactcgtaaagaaattgcttccagattgaatgtatcttct
caaactgtaaactatagagtagggcaggctttaaagcttcttcgaatggcattgaaaaaa
tttctcccctcgcttctggccgtcgttctttgggggttatag
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