Chlamydia abortus S26/3: CAB975
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Entry
CAB975 CDS
T00242
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cab
Chlamydia abortus S26/3
Pathway
cab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CAB975 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cab03400
]
CAB975 (recD)
Enzymes [BR:
cab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CAB975 (recD)
DNA repair and recombination proteins [BR:
cab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CAB975 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
PIF1
SLFN-g3_helicase
Helicase_RecD
PhoH
AAA
DEAD
AAA_22
nSTAND3
ATPase
ResIII
AAA_12
AAA_25
DnaB_C
IstB_IS21
AAA_28
Motif
Other DBs
NCBI-ProteinID:
CAH64413
UniProt:
Q5L4N4
LinkDB
All DBs
Position
complement(1136343..1137857)
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AA seq
504 aa
AA seq
DB search
MLSLSPDVSHLLHDVVQQQIVLPLDLAFAKHHISAESKKAFAFLAISSALWRCGYPFLSI
ENERLFPSISGISETLFYEYFRALPHDVLSSLFVIENNKIYLKSLYTVREKLFKKLSLLS
QATNRYSLTTPTLPSLSQEQNKVFHKAVNRCFSLICGGPGTGKTFLAVQIIIALIKQYPK
IRIAIVSPTGKATSHIRHILSKHHISEASVTIQTIHRFLQEHAYHQCTSFDLLLVDEGSM
VTLSLLHSLVNTLSGENKRGEILADNLIILGDENQLPPIGVGAGNPLQDLIVRFPERALH
LHVSHRAKTHRVQDFAKAILERQAIPFTPLPPMLTALSRIKEAFIHTPSSQTQLCVLTPM
RHGPWGYLRLNELIFHEIQKTHPELPIPIMITKRYEAWGLFNGDTGYLCPKTQKLFFSHS
RVIDAKEFSYYTYNYAMSVHKSQGSEYEDVIVILPKGCETFDISILYTAITRAKNNIDVW
ADRETLYKIIKKPHKYTYGVDRLP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgttaagcccggatgtttctcaccttcttcatgatgtagttcaacagcagatt
gttctacctttagacctagcttttgcgaagcaccatatctctgcagaatcaaaaaaagcc
ttcgcctttcttgcgatttcttctgctctttggcgttgtggttatccctttcttagtata
gaaaatgaacgtctgttcccctcaatatccgggatttctgaaacgttgttttacgaatat
tttcgggctcttcctcacgatgttttgtcgtcgttgtttgtaatagaaaataataaaatc
tacttaaaatctttatatacagttcgtgagaagctttttaaaaaactttctttgttgtca
caagctactaatcgctacagcctgacgacaccaactctaccgagtttatctcaggagcaa
aataaggtttttcacaaagctgtgaacaggtgtttttctttgatctgcggtggacctgga
acaggtaagacatttctcgctgtacagatcatcatcgcattaattaagcagtatcctaaa
attcgtattgctatagtctctcctacaggaaaagccacctcgcatatccgtcacatactc
tcgaaacatcatatttctgaagccagtgtcacaattcaaacaatacatcggttcttgcaa
gaacatgcttatcaccaatgtacttcttttgatttattgctcgttgatgaagggtctatg
gtgacattgagtcttctgcatagcttagtcaatactttgtcaggagaaaataaacgaggg
gaaatccttgctgataatttaattatattgggagatgagaatcaactaccccctataggt
gttggcgccggaaaccctctgcaggatttgatcgtccgtttccctgaaagagctctacat
cttcatgtgtctcatagagctaaaacacatcgagttcaagattttgctaaagctatttta
gaaagacaagccattccctttacgcctctgcctcctatgctcactgcactgtctaggatt
aaagaggcatttatacataccccttcatctcaaacgcaattgtgcgttttaacacctatg
cgccatggtccttggggatacctacgcttaaatgaactgatctttcatgaaatacaaaaa
acacatccagagttgcccattcctattatgataacaaaacgttatgaagcttggggacta
tttaatggcgatacggggtacctttgcccaaagacgcaaaagttatttttttctcattcc
cgcgttatagatgctaaagagttttcctattacacctataactatgctatgtccgtacat
aaaagtcagggaagtgagtatgaagatgttattgttattctccctaaagggtgtgaaact
tttgatatttctattctttacacagccatcacacgtgctaagaacaacatagatgtgtgg
gctgaccgagagacattgtataagatcataaaaaaaccccataagtatacttatggggta
gatcgtcttccttag
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