Caballeronia sp. SBC2: SBC2_08070
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Entry
SBC2_08070 CDS
T06459
Name
(GenBank) DNA polymerase III chi subunit, HolC
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03030
DNA replication
caba03430
Mismatch repair
caba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SBC2_08070
03430 Mismatch repair
SBC2_08070
03440 Homologous recombination
SBC2_08070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caba03032
]
SBC2_08070
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_08070
Enzymes [BR:
caba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SBC2_08070
DNA replication proteins [BR:
caba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SBC2_08070
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SBC2_08070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
QIE22795
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All DBs
Position
906032..906457
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AA seq
141 aa
AA seq
DB search
MTRIDFHSNVGDSIAYACRLVRKAYLSGQPLIVLAEPERLKQFDEQLWTFKPLEFVPHCM
ADSALAGQTPVLLTASLESLVQDQRHQILLNLGATVPPQFARFERLLEVVGNEEHELVAG
RDRYRFYRDRGYVLNNYKQGG
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtatcgatttccattcgaatgtgggggattcgatcgcgtacgcctgccgcctt
gtgcgcaaggcttacctgagcggccagccgttaatcgtgctggctgaacccgagcggttg
aagcagttcgacgagcaattgtggaccttcaagccgctcgagttcgtgccgcattgcatg
gcggacagcgcgctggcggggcaaacgccggtgttgctgacggcgtcgctggagtcgctg
gtgcaggatcagcggcatcagatcctgctgaatctcggcgcaacggtgccgccgcagttc
gcgcggtttgaacgcctgctggaagtggtcggcaacgaggagcacgaactcgtggccggg
cgcgaccggtatcggttctatcgcgatcggggctacgtgctcaacaactacaagcagggc
ggctga
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